| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1601 |
|---|
| Symbol | rpsI |
|---|
| ID | 5712745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 1666178 |
|---|
| End bp | 1666672 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641267516 |
|---|
| Product | 30S ribosomal protein S9 |
|---|
| Protein accession | YP_001532944 |
|---|
| Protein GI | 159044150 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0103] Ribosomal protein S9 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.292372 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAG AGATCAAATC CTTCGACGAC CTGAGTGCCG TCGCTGAGGG CTCCGTCGCC
GAGGCGACCC CCGAAACCAC CATCTCGCGC GAACCTGTCC GCGACGACCT GGGCCGGTCC
TATGCGACTG GTAAGCGGAA GGACGCGGTT GCCCGTGTCT GGATTCGTCC GGGCTCCGGC
AAGATCACCG TGAACGGCAA GTCCATGGAC ACCTATTTCG CGCGCCCGGT GCTGCAGATG
ATCCTGCGCC AGCCGTTCCA GGTCGCCGGG GTCGAGGACC AGTTCGATGT CACCGCCACG
GTCAAGGGCG GTGGGCTGTC GGGTCAGGCC GGTGCCGTGC GGCACGGTGT ATCCAAGGCG
CTGCAGCTCT ATGAGCCCTC CCTGCGTGGC GCGCTCAAGG CGGCGGGTTT CCTGACACGC
GACAGCCGCG TGGTGGAGCG GAAGAAATAC GGCAAGGCCA AGGCCCGGAA GAGCTTCCAG
TTCTCCAAGC GCTGA
|
|---|
| Protein sequence | MAEEIKSFDD LSAVAEGSVA EATPETTISR EPVRDDLGRS YATGKRKDAV ARVWIRPGSG
KITVNGKSMD TYFARPVLQM ILRQPFQVAG VEDQFDVTAT VKGGGLSGQA GAVRHGVSKA
LQLYEPSLRG ALKAAGFLTR DSRVVERKKY GKAKARKSFQ FSKR
|
|---|
| |