| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1541 |
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| Symbol | |
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| ID | 5713198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1602173 |
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| End bp | 1604119 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267456 |
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| Product | putative amidohydrolase 3 |
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| Protein accession | YP_001532884 |
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| Protein GI | 159044090 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.260198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.229672 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGCT TTCTGCCCCT GATCGCCGCC CTTCTCGCGG CCCTCGCCGC CCCCCTCGCA
CTGGCCGACA CCGACACCGA CACCGCCTTC GCCGACCGGA TCTGGACCGG CGGGCCGATC
CTGACCATGG AAGACAACGC CATGCGCGCC GAGGCCCTGG CCGAAAAGGA CGGCGTGATC
CTCGGCGTCG GACCTCTCGA CGAGGTCACC GCCTTCCAGG GACCCCAGAC GCAGATGATC
GACCTGGCCG GGCGCACCAT GATCCCGGGC TTCGTGGACG CCCACGGCCA TGTCTTCATG
ATCGGCCTGC AGGCGCTCTC GGCCAACCTG TTGCCCGCAC CCGATGGCAC CGTGAACGAC
ATCCCGACCC TGCAAGCGGT GCTGCGCGCC TTCGCCGAGG CCCAGCCCGA GCGTGTCGCG
GCCGCCGGTC TCATCCTCGG CTTCGGCTAT GACGACGCCC AGCTGGCCGA GCAGCGGCAT
CCGACACGGG ACGAGCTCGA CGCCGTCTCC ACCGAGATCC CGGTCTATGC CATCCACCAA
TCCGGCCATC TCGGCGTGGC CAACTCACTG GCACTCGAAC AGGCTGGCAT CACCGCCGAC
ACCCCCGACC CGGCGGGGGG CGTCATCCGC CGCGGCCCGG ATGGCGCACC CAACGGCGTG
CTCGAGGAAA ACGCCGCCAA CATGGTGATC GGCGGTCTGC TCGGCGGGCT GGACGAAGCC
GCCAACCGCG CGATCTTTCG CGCGGGCACC GAGTTGATCG CCTCTTTCGG CTACACCACC
GCGCAGGAAG GCCGCGCGCT CCCGCCCGTG GCCGAGCTGA TGCAATCCGT CGCCGCCGAA
GAAGGGCTGG ACATCGACGT GGTGGTCTAC CCCGATGTGC TGCTGGCCCG CGACTACATC
CTGGAACACC ACGCGCGGGT CTACGAGAAC CGGATCCGCG TCGGCGGCGG CAAGCTGACC
ATCGACGGAT CGCCCCAGGG CTTCACCGCC CTGCGCGACC GGCCCTATTA CGACCCGCCC
GAAGGGGTTC GCGCCGATTA CGCGGGCTAT GCCTCGGCCA GCGGCGACCA GGTGTTCGAC
GCGGTCGACT GGGCCTTCGC CAACGGGGTG CAGATCCAGA CCCATGCCAA TGGGGAAGGG
GCCTCCGACA TGCTGATCGC GGCCATTCAG ACCGCGACAG AGACTCACGG GGCCGCCGAC
CGCCGCCCGG TCCTGATCCA CGGGCAGTTT TTGCGCGAGG ACCAGGTGGA CGCCTATAAC
CGGCTCGATG TGTTCCCCTC GCTCTTTCCG ATGCACACCT TCTATTGGGG CGACTGGCAC
CGTGACCGCA CCGTGGGGCC CGTGGCCGCC GACAACATCT CGCCCACGGG TTGGGTACGG
GCGCGTGGCA TGATGTTCTC CAGCCACCAT GACGCGCCCG TGGCCTTCCC CGATAGCATG
CGCATCCTGG ACGCCACCGT CACCCGGCGC TCGCGGTCCG GCGACATCAT CGGCCCCGAC
CACCGGGTCG ACGTGCTCAC CGCGCTCAAG GCGATGACGA TCTGGCCCGC CTACCAGCAT
TTCGAGGAAG ACAGCAAAGG CTCCCTCGCG CCGGGCAAAC TGGCCGATCT CGTCATATTG
TCAGACGATC CGACCGTGAT CGATCCCGAA CAACTCGACA CGATCACCGT GGTCGAGACC
ATCAAGGAGG GACAGACGAT CTACGCCGCG GGCTTGCGCG AGGGGCGGCT GCATTACCGC
CCGCGCAGGG ACGGCACCGA CCCCTATGCC GGGTTCCTGC GCACCGTGGC CATCGCCCAC
GAGATGCAAG GCAATCCCGG CATGCTGAGC CGCATCCGCC CCTCGACCCT GGCACGCGCG
CCCCATTCCA GCGCCTGCGT CGCCCGCACC CTGAGCGACC TGATCACCGC CAACCTGTCC
CTGCCGGACA CGCCTTTGCT TCCCTGA
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| Protein sequence | MPRFLPLIAA LLAALAAPLA LADTDTDTAF ADRIWTGGPI LTMEDNAMRA EALAEKDGVI
LGVGPLDEVT AFQGPQTQMI DLAGRTMIPG FVDAHGHVFM IGLQALSANL LPAPDGTVND
IPTLQAVLRA FAEAQPERVA AAGLILGFGY DDAQLAEQRH PTRDELDAVS TEIPVYAIHQ
SGHLGVANSL ALEQAGITAD TPDPAGGVIR RGPDGAPNGV LEENAANMVI GGLLGGLDEA
ANRAIFRAGT ELIASFGYTT AQEGRALPPV AELMQSVAAE EGLDIDVVVY PDVLLARDYI
LEHHARVYEN RIRVGGGKLT IDGSPQGFTA LRDRPYYDPP EGVRADYAGY ASASGDQVFD
AVDWAFANGV QIQTHANGEG ASDMLIAAIQ TATETHGAAD RRPVLIHGQF LREDQVDAYN
RLDVFPSLFP MHTFYWGDWH RDRTVGPVAA DNISPTGWVR ARGMMFSSHH DAPVAFPDSM
RILDATVTRR SRSGDIIGPD HRVDVLTALK AMTIWPAYQH FEEDSKGSLA PGKLADLVIL
SDDPTVIDPE QLDTITVVET IKEGQTIYAA GLREGRLHYR PRRDGTDPYA GFLRTVAIAH
EMQGNPGMLS RIRPSTLARA PHSSACVART LSDLITANLS LPDTPLLP
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