Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1476 |
Symbol | gyrA |
ID | 5712654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1530153 |
End bp | 1532894 |
Gene Length | 2742 bp |
Protein Length | 913 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641267390 |
Product | DNA gyrase subunit A |
Protein accession | YP_001532819 |
Protein GI | 159044025 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0249688 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGATA CCCCGGAACC CCCTGAAAAC ACAGACGAAA CTCCGCCCGG CGGCGGTCGG ATACAGGAAA CCATCTCGAT CGCCGAAGAG ATGAAGAGCT CCTATCTCGA TTACGCCATG AGCGTGATCG TGAGCCGGGC GATTCCGGAC CTCCGCGACG GGTTGAAACC GGTGCATCGG CGGATCCTCT ACGCCATGCA CGAGACCGGC AACACCCACG AGAAGGCCTA TCGCAAATCC GCCCGCCCCG TGGGCGATGT GATGGGCAAG TACCACCCGC ACGGCGATTC CGCGATCTAT GACGCCCTGG TGCGGATGGC ACAGGATTTC TCCATGTCCC TGCCGCTTCT GGACGGGCAA GGCAACTTCG GCTCCATGGA CGGCGACAAC CCCGCCGCCA TGCGCTACAC CGAGGTGCGG ATGGACAAAC CGGCGGCGGC GCTTCTCGCG GATATCGAGA AGGAGACCGT TGATTTTCAA GACAATTATG ATGGCAAGGA TCGCGAGCCC ACGGTCCTTC CGGCGCGGTT TCCGAACATG CTGGTCAATG GCGCGGGCGG CATCGCCGTG GGCATGGCGA CCAACATTCC GCCCCATAAC CTGGGCGAGG TGATCGACGC CACGCTCGCG CTGATCGAGA CCCCGGATCT CGAGGTCGAG GACCTGATGC AATACATCCC CGCCCCGGAT TTCCCCACGG GCGGGCAGAT CCTCGGCCGG GGTGGCGCGC GCAAGGCCTA TCTCGAAGGC CGCGGCTCGG TCATCATCCG CGCCAAGACC CGGATCGAGG AGCTGCGCAA GGACCGCTAC GCCATCGTGC TCGACGAGAT CCCCTACCAG GTCAACAAGT CCTCCATGAT CGAGAAGATC GCCGAACTGG TGCGCGAGAA GCGGATCGAA GGCATCGCCC ATGTGCAGGA CGAGAGCGAC CGGGTCGGCG TCCGCGTGGT GATCGAGCTG AAACGCGACG CCACCCCCGA GGTGGTGCTG AACCAGCTCT ACCGCTTCAC CCCGATGCAG ACCTCTTTCG GCTGCAACAT GCTGGCGCTG AACGGCGGCC GGCCCGAGCA GCTGACGCTC AAGGATTTCC TGAGCAGTTT CATATCCTTC CGCGAGGAAG TTGTCGCGCG TCGCACGGCC TATGACCTGC GCAAGGCGCG CGAGCGGTCC CATGTGCTCT GCGGTCTGGC GGTGGCGGTT TCGAACGTGG ACGAGGTGGT GGCCACCATC CGCGCCTCCG CCGACGCCGC CGAGGCGCGC GAGAAGCTGA TGACCCGGCG CTGGCCCGCC GCCGACATCG CCGATTACAT CCGGCTGATC GACGACCCGA CCCACACGAT GAACGAGGAC GGCACCTACA ACCTGTCGGA AACCCAGGCC CGCGCGATCC TCGATCTGCG GCTGCAGCGC CTGACCCAGA TCGGCGTCAA GGAGGTGACT GACGAGCTGC AGGAGCTCGC CGCGAAGATC CAGGAATACC TCGACATCCT GCGCTCGCGC TCCCGGATCA TGGCGATCAT CTCGGACGAG CTGCGCGAGG TGAAGGATCA ATTCGCCGTC CCCCGCCGCA CGGAGATCAC CGACTGGTCC GGCGACATGG AGGACGAGGA CCTGATCGAG CGGGAGGACA TGGTCGTCAC CGTCACCTCC GGCGGCTATA TCAAGCGCAC CCCACTGGTC GAATTCCGTG CCCAACGGCG CGGCGGCAAG GGCCTGGCGG GCATGGCCAC CAAGGAAGAC GACGTGGTCA CGACCCTCTT CGTGGCCAAC ACCCACACGC CGCTTCTGGT CTTCACCACG GACGGGATGG TCTACAAGCT CAAGACCTGG CGCCTGCCTT CGGGGGGGCG CAACGCGCGT GGCAAGGCGC TAGTCAACGT GCTGCCGATC GACCCCGGCA CCTCCATCGC GGCGATCATG CCTGTGGACC GGGCCGAGGA AGACTGGGCC GACCTGCAGA TCGTCTTCGC CACCTCGGCG GGCGACGTGC GGCGCAACGC GCTGAGCGAT TTCACCAATG TCATGCGCAA CGGCAAGATC GCCATGAAAC TGCCCGAGGG CGTCAGCCTG GTGAAGGCGC GGATCTGTTC CGAGGAGGAC GACGTGATGC TGGTCACGGC CCTGGGCCGC GCGATCCGCT TCCGGACCAC GGATGTGCGG GTCTTCAAGG GCCGCGATTC GACCGGCGTG CGCGGCGTGC GGCTGGCCGA GGGCGACCGG GTGGTGTCGA TGGCCGTGAT CCGGCATTTC GTCGCCGACC CGCAGGAGCG CGCCGCTTAC CTGAAAATGC GCCGCGCCGT GGCCGGGCTC TCCGAGGAGG CCGAGAGCGA GGACGAGGAC ACCGTCGAAG CCGGGCAGCT GAGCCCCGAG CGCTATGCCG AGATGTCGGC GGCCGAGGAC CTGATCCTGA CCATCACCGA GGGCGGCACC GGCAAGATCA GCTCGTCCCA CGACTACCCG GTGCGTGGCC GGGGCGGCCA GGGGGTGACG GCCATGGACA AGGCGATGCG GGGCGGCCCG CTGGTGGCGT GCTTCCCGGT GGAGATCGAT GACCAGATCA TGCTGGCCAC CTCCACCGGC CAGTCGATCC GCTGTCCCGT GGATGGCATC AGCTTCCGCT CCCGCGCCGC CGGAGGCGTC AAGGTGTTCA ACACCGCGCC CGGGGAACAG GTGGTCTCGG TGGCCTATAT CGCCGACCGA GGTGAAGCGG ATGGCGACGA CCCGGCCCCC GAGGCGGGCT GA
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Protein sequence | MTDTPEPPEN TDETPPGGGR IQETISIAEE MKSSYLDYAM SVIVSRAIPD LRDGLKPVHR RILYAMHETG NTHEKAYRKS ARPVGDVMGK YHPHGDSAIY DALVRMAQDF SMSLPLLDGQ GNFGSMDGDN PAAMRYTEVR MDKPAAALLA DIEKETVDFQ DNYDGKDREP TVLPARFPNM LVNGAGGIAV GMATNIPPHN LGEVIDATLA LIETPDLEVE DLMQYIPAPD FPTGGQILGR GGARKAYLEG RGSVIIRAKT RIEELRKDRY AIVLDEIPYQ VNKSSMIEKI AELVREKRIE GIAHVQDESD RVGVRVVIEL KRDATPEVVL NQLYRFTPMQ TSFGCNMLAL NGGRPEQLTL KDFLSSFISF REEVVARRTA YDLRKARERS HVLCGLAVAV SNVDEVVATI RASADAAEAR EKLMTRRWPA ADIADYIRLI DDPTHTMNED GTYNLSETQA RAILDLRLQR LTQIGVKEVT DELQELAAKI QEYLDILRSR SRIMAIISDE LREVKDQFAV PRRTEITDWS GDMEDEDLIE REDMVVTVTS GGYIKRTPLV EFRAQRRGGK GLAGMATKED DVVTTLFVAN THTPLLVFTT DGMVYKLKTW RLPSGGRNAR GKALVNVLPI DPGTSIAAIM PVDRAEEDWA DLQIVFATSA GDVRRNALSD FTNVMRNGKI AMKLPEGVSL VKARICSEED DVMLVTALGR AIRFRTTDVR VFKGRDSTGV RGVRLAEGDR VVSMAVIRHF VADPQERAAY LKMRRAVAGL SEEAESEDED TVEAGQLSPE RYAEMSAAED LILTITEGGT GKISSSHDYP VRGRGGQGVT AMDKAMRGGP LVACFPVEID DQIMLATSTG QSIRCPVDGI SFRSRAAGGV KVFNTAPGEQ VVSVAYIADR GEADGDDPAP EAG
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