| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1476 |
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| Symbol | gyrA |
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| ID | 5712654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1530153 |
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| End bp | 1532894 |
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| Gene Length | 2742 bp |
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| Protein Length | 913 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641267390 |
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| Product | DNA gyrase subunit A |
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| Protein accession | YP_001532819 |
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| Protein GI | 159044025 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0249688 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGATA CCCCGGAACC CCCTGAAAAC ACAGACGAAA CTCCGCCCGG CGGCGGTCGG
ATACAGGAAA CCATCTCGAT CGCCGAAGAG ATGAAGAGCT CCTATCTCGA TTACGCCATG
AGCGTGATCG TGAGCCGGGC GATTCCGGAC CTCCGCGACG GGTTGAAACC GGTGCATCGG
CGGATCCTCT ACGCCATGCA CGAGACCGGC AACACCCACG AGAAGGCCTA TCGCAAATCC
GCCCGCCCCG TGGGCGATGT GATGGGCAAG TACCACCCGC ACGGCGATTC CGCGATCTAT
GACGCCCTGG TGCGGATGGC ACAGGATTTC TCCATGTCCC TGCCGCTTCT GGACGGGCAA
GGCAACTTCG GCTCCATGGA CGGCGACAAC CCCGCCGCCA TGCGCTACAC CGAGGTGCGG
ATGGACAAAC CGGCGGCGGC GCTTCTCGCG GATATCGAGA AGGAGACCGT TGATTTTCAA
GACAATTATG ATGGCAAGGA TCGCGAGCCC ACGGTCCTTC CGGCGCGGTT TCCGAACATG
CTGGTCAATG GCGCGGGCGG CATCGCCGTG GGCATGGCGA CCAACATTCC GCCCCATAAC
CTGGGCGAGG TGATCGACGC CACGCTCGCG CTGATCGAGA CCCCGGATCT CGAGGTCGAG
GACCTGATGC AATACATCCC CGCCCCGGAT TTCCCCACGG GCGGGCAGAT CCTCGGCCGG
GGTGGCGCGC GCAAGGCCTA TCTCGAAGGC CGCGGCTCGG TCATCATCCG CGCCAAGACC
CGGATCGAGG AGCTGCGCAA GGACCGCTAC GCCATCGTGC TCGACGAGAT CCCCTACCAG
GTCAACAAGT CCTCCATGAT CGAGAAGATC GCCGAACTGG TGCGCGAGAA GCGGATCGAA
GGCATCGCCC ATGTGCAGGA CGAGAGCGAC CGGGTCGGCG TCCGCGTGGT GATCGAGCTG
AAACGCGACG CCACCCCCGA GGTGGTGCTG AACCAGCTCT ACCGCTTCAC CCCGATGCAG
ACCTCTTTCG GCTGCAACAT GCTGGCGCTG AACGGCGGCC GGCCCGAGCA GCTGACGCTC
AAGGATTTCC TGAGCAGTTT CATATCCTTC CGCGAGGAAG TTGTCGCGCG TCGCACGGCC
TATGACCTGC GCAAGGCGCG CGAGCGGTCC CATGTGCTCT GCGGTCTGGC GGTGGCGGTT
TCGAACGTGG ACGAGGTGGT GGCCACCATC CGCGCCTCCG CCGACGCCGC CGAGGCGCGC
GAGAAGCTGA TGACCCGGCG CTGGCCCGCC GCCGACATCG CCGATTACAT CCGGCTGATC
GACGACCCGA CCCACACGAT GAACGAGGAC GGCACCTACA ACCTGTCGGA AACCCAGGCC
CGCGCGATCC TCGATCTGCG GCTGCAGCGC CTGACCCAGA TCGGCGTCAA GGAGGTGACT
GACGAGCTGC AGGAGCTCGC CGCGAAGATC CAGGAATACC TCGACATCCT GCGCTCGCGC
TCCCGGATCA TGGCGATCAT CTCGGACGAG CTGCGCGAGG TGAAGGATCA ATTCGCCGTC
CCCCGCCGCA CGGAGATCAC CGACTGGTCC GGCGACATGG AGGACGAGGA CCTGATCGAG
CGGGAGGACA TGGTCGTCAC CGTCACCTCC GGCGGCTATA TCAAGCGCAC CCCACTGGTC
GAATTCCGTG CCCAACGGCG CGGCGGCAAG GGCCTGGCGG GCATGGCCAC CAAGGAAGAC
GACGTGGTCA CGACCCTCTT CGTGGCCAAC ACCCACACGC CGCTTCTGGT CTTCACCACG
GACGGGATGG TCTACAAGCT CAAGACCTGG CGCCTGCCTT CGGGGGGGCG CAACGCGCGT
GGCAAGGCGC TAGTCAACGT GCTGCCGATC GACCCCGGCA CCTCCATCGC GGCGATCATG
CCTGTGGACC GGGCCGAGGA AGACTGGGCC GACCTGCAGA TCGTCTTCGC CACCTCGGCG
GGCGACGTGC GGCGCAACGC GCTGAGCGAT TTCACCAATG TCATGCGCAA CGGCAAGATC
GCCATGAAAC TGCCCGAGGG CGTCAGCCTG GTGAAGGCGC GGATCTGTTC CGAGGAGGAC
GACGTGATGC TGGTCACGGC CCTGGGCCGC GCGATCCGCT TCCGGACCAC GGATGTGCGG
GTCTTCAAGG GCCGCGATTC GACCGGCGTG CGCGGCGTGC GGCTGGCCGA GGGCGACCGG
GTGGTGTCGA TGGCCGTGAT CCGGCATTTC GTCGCCGACC CGCAGGAGCG CGCCGCTTAC
CTGAAAATGC GCCGCGCCGT GGCCGGGCTC TCCGAGGAGG CCGAGAGCGA GGACGAGGAC
ACCGTCGAAG CCGGGCAGCT GAGCCCCGAG CGCTATGCCG AGATGTCGGC GGCCGAGGAC
CTGATCCTGA CCATCACCGA GGGCGGCACC GGCAAGATCA GCTCGTCCCA CGACTACCCG
GTGCGTGGCC GGGGCGGCCA GGGGGTGACG GCCATGGACA AGGCGATGCG GGGCGGCCCG
CTGGTGGCGT GCTTCCCGGT GGAGATCGAT GACCAGATCA TGCTGGCCAC CTCCACCGGC
CAGTCGATCC GCTGTCCCGT GGATGGCATC AGCTTCCGCT CCCGCGCCGC CGGAGGCGTC
AAGGTGTTCA ACACCGCGCC CGGGGAACAG GTGGTCTCGG TGGCCTATAT CGCCGACCGA
GGTGAAGCGG ATGGCGACGA CCCGGCCCCC GAGGCGGGCT GA
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| Protein sequence | MTDTPEPPEN TDETPPGGGR IQETISIAEE MKSSYLDYAM SVIVSRAIPD LRDGLKPVHR
RILYAMHETG NTHEKAYRKS ARPVGDVMGK YHPHGDSAIY DALVRMAQDF SMSLPLLDGQ
GNFGSMDGDN PAAMRYTEVR MDKPAAALLA DIEKETVDFQ DNYDGKDREP TVLPARFPNM
LVNGAGGIAV GMATNIPPHN LGEVIDATLA LIETPDLEVE DLMQYIPAPD FPTGGQILGR
GGARKAYLEG RGSVIIRAKT RIEELRKDRY AIVLDEIPYQ VNKSSMIEKI AELVREKRIE
GIAHVQDESD RVGVRVVIEL KRDATPEVVL NQLYRFTPMQ TSFGCNMLAL NGGRPEQLTL
KDFLSSFISF REEVVARRTA YDLRKARERS HVLCGLAVAV SNVDEVVATI RASADAAEAR
EKLMTRRWPA ADIADYIRLI DDPTHTMNED GTYNLSETQA RAILDLRLQR LTQIGVKEVT
DELQELAAKI QEYLDILRSR SRIMAIISDE LREVKDQFAV PRRTEITDWS GDMEDEDLIE
REDMVVTVTS GGYIKRTPLV EFRAQRRGGK GLAGMATKED DVVTTLFVAN THTPLLVFTT
DGMVYKLKTW RLPSGGRNAR GKALVNVLPI DPGTSIAAIM PVDRAEEDWA DLQIVFATSA
GDVRRNALSD FTNVMRNGKI AMKLPEGVSL VKARICSEED DVMLVTALGR AIRFRTTDVR
VFKGRDSTGV RGVRLAEGDR VVSMAVIRHF VADPQERAAY LKMRRAVAGL SEEAESEDED
TVEAGQLSPE RYAEMSAAED LILTITEGGT GKISSSHDYP VRGRGGQGVT AMDKAMRGGP
LVACFPVEID DQIMLATSTG QSIRCPVDGI SFRSRAAGGV KVFNTAPGEQ VVSVAYIADR
GEADGDDPAP EAG
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