| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1474 |
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| Symbol | |
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| ID | 5712652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1527727 |
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| End bp | 1528590 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641267388 |
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| Product | glutamyl-tRNA synthetase class Ic |
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| Protein accession | YP_001532817 |
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| Protein GI | 159044023 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.104503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.08026 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACCC GCTTCGCCCC TTCGCCCACC GGGCCGCTTC ATCTGGGTCA CGGCTTCTCC
GCCCTGACGG CGTGGCGGAT GGCGCAGGCG GCGGGCGGCA CCTTCCTGCT TCGGATCGAA
GATATCGATC CGAGCCGCGC GCGCCCGGAA TGGGAGGCGC TGATCTACGC GGATCTGCGC
TGGCTGGGCC TGGATTGGCC GGAGCCGGTG ATGCGGCAGT CCGAGCGGGC CGAAGCCTAT
GCCGCGGCGC TCGATGTCCT CTGGGATTGC GGCTTGCTCT ATCCCTGCAG CTGCAGTCGC
CGGGACATCC AGGAGGCCGC GCGCGCCCCG CAGGAGGGCG CGCCGCTGCT GGGCCCGGAC
GGCGTGGTCT ATCCCGGCAC CTGTCGCGGG CGGGACCGGG GCGGCGCCCG GCCCGAGGGT
GCGGTGCTGC GGCTGGACAT GGCGGCGGCG CTGGCCGCAC TCGGCGCGCG CGAGTTGGGC
TTTAGCGAGA CGGGTCAGGG GCTTGAGGGG CACGGTGGAT ATGTCGGTTT GACCCCGGAG
AACTTGCTGT CCCATGTGGG GGATGTCGTC TTGTGCCGCC GGGACATGGC GACCTCCTAT
CACCTGTCGG TGGTGGTGGA CGATGCCGCG CAAGGGATCA CCCATGTGGT GCGCGGGCGC
GACCTGTTCG AGGCAACCGC GATCCATGTG GTGCTGCAGG CCCTCTTGGA GCTGCCGGTC
CCGGACTACC ACCATCACCG CCTGATCCGC GACGCGACCG GCAAGCGGCT GGCCAAGCGC
GACGATGCGC GGGCGCTGTC GGCCTATCGG GCGGAAGGGC TGTCGCCTCA GCAGGTTATC
GCGTTGTTTG AAAGTTCTGC GTGA
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| Protein sequence | MNTRFAPSPT GPLHLGHGFS ALTAWRMAQA AGGTFLLRIE DIDPSRARPE WEALIYADLR
WLGLDWPEPV MRQSERAEAY AAALDVLWDC GLLYPCSCSR RDIQEAARAP QEGAPLLGPD
GVVYPGTCRG RDRGGARPEG AVLRLDMAAA LAALGARELG FSETGQGLEG HGGYVGLTPE
NLLSHVGDVV LCRRDMATSY HLSVVVDDAA QGITHVVRGR DLFEATAIHV VLQALLELPV
PDYHHHRLIR DATGKRLAKR DDARALSAYR AEGLSPQQVI ALFESSA
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