| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1466 |
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| Symbol | obgE |
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| ID | 5712644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1520948 |
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| End bp | 1521985 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267380 |
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| Product | GTPase ObgE |
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| Protein accession | YP_001532809 |
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| Protein GI | 159044015 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0536] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.913357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0387806 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCC TCGATCTGGC CAAAGTCTAT ATCCGCTCCG GCGGCGGCGG CACCGGGGCG
ATCAGCTTCC GGCGCGAGAA ATACATCGAA TACGGTGGCC CCGATGGCGG CGATGGCGGG
CGCGGCGGCG ATGTCTGGGT CGAGGCGGTC GACGGGCTCA ACACCCTGAT CGACTTCCGC
TACCAACAGC ATTTCTTCGC CAAGTCCGGC CAGCACGGCA TGGGCAAGCA GCGCACCGGC
AAGGACGGGG CCGGCGTGAC CCTGCGCGTG CCCGTGGGCA CCGAGATTCT CGAAGAGGAC
GAAGAGACCG TGATCGCCGA CATGACCGAG ATCGGCCAAA GGGTGCTTCT GGCCAAGGGC
GGCAATGGCG GCTTCGGCAA CCTGCATTTC AAATCCGCCA CCAACCAGGC CCCGCGCCGG
GCCAATCCCG GCCAGCCGGG GGTGGAGCGG ACGATCTGGC TGCGGCTGAA GCTGATCGCC
GATGCGGGGC TTCTGGGCCT GCCCAATGCG GGCAAGTCGA CCTTTCTCGC CGCGACCTCC
AACGCCCGGC CCAAGATTGC CGATTACCCG TTCACCACCC TGCATCCCAA CCTGGGCGTC
GTGGGCGTGG ACGGGACCGA GTTCGTGATG GCCGACATCC CCGGCCTGAT CGAGGGCGCC
CATGAGGGCC GCGGCATCGG CGACCGCTTC CTCGGCCATG TGGAACGTTG CGCGGTGCTG
TTGCACCTGG TGGACGGCAC CGCCGAGGAC GTGGTGGCCG ACTACCGCAC CATCCTCACC
GAGTTGCAGG CCTATGGCGG CGCCCTGGCG ACCAAGCCGC GGGTCACGGC CCTGAACAAG
ATCGACGCGC TGGACGAGCA AGAGCGTGCC GAGAAGGCCG CCGCCCTCCA GGCCGCCAGC
GGCTTTCCCG TGCTGCAGCT CTCGGGCGTG TCGGGCGAGG GGGTGCAGGA TGTCTTGCGC
GCCGTGCGCC GACGGATCGA CGGCGCGCGC CAGGCCGAGG AGGCCACGGA TCGGGAGGAT
ACCTCTTGGC AACCCTGA
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| Protein sequence | MKFLDLAKVY IRSGGGGTGA ISFRREKYIE YGGPDGGDGG RGGDVWVEAV DGLNTLIDFR
YQQHFFAKSG QHGMGKQRTG KDGAGVTLRV PVGTEILEED EETVIADMTE IGQRVLLAKG
GNGGFGNLHF KSATNQAPRR ANPGQPGVER TIWLRLKLIA DAGLLGLPNA GKSTFLAATS
NARPKIADYP FTTLHPNLGV VGVDGTEFVM ADIPGLIEGA HEGRGIGDRF LGHVERCAVL
LHLVDGTAED VVADYRTILT ELQAYGGALA TKPRVTALNK IDALDEQERA EKAAALQAAS
GFPVLQLSGV SGEGVQDVLR AVRRRIDGAR QAEEATDRED TSWQP
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