Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1417 |
Symbol | |
ID | 5712593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1470855 |
End bp | 1471379 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641267329 |
Product | protein of unknown function DUF1486 |
Protein accession | YP_001532760 |
Protein GI | 159043966 |
COG category | [R] General function prediction only |
COG ID | [COG5485] Predicted ester cyclase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.289435 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGGGG CGCGTCCGGA GCAGGCGGTT CTGAGCCGGG ACACGGACAT GAGCCGGACC GCCGCGACCC GCGCGGTGAT CGAGGGGATG GTCGACGGGC TGAACGATCA CAGGATCGCG GATATCGGGG AGTTTTTCGC CGAGGGCTTC GGCTGGCATG GCAACCGGGG GTGCGGGACC AAGCGGGGTC TGCGGGAGTT TCAGGAGAAC TGGCAGAAAC CGTTCCAGGC GGCGTTTTCC GACAAGGTCT GCATCGACGA GGCGCGGCTC TACATGGGCG AGTGGGCGGC GGCCTTCGGG CGGCAGGAGG CGGTGCATTC GGGCACGTTC ATGGGGATCG CGCCCACGGG CAAGCGGGTG GAGATCCGCT ACATGGATTT CTGGAAGGTG GTGGACGGCA AGATCGTCGA CAACTGGGTC ATGGTAGATT TTCCCCATGT GCTGGCGCAG CTGGGCCGGG ACGTCTTCGC GGGCGAGGGC TGGGAGGCGT TCGACCGGGG CGAGAAGGTG CCGCCGGCCC CTTAG
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Protein sequence | MSGARPEQAV LSRDTDMSRT AATRAVIEGM VDGLNDHRIA DIGEFFAEGF GWHGNRGCGT KRGLREFQEN WQKPFQAAFS DKVCIDEARL YMGEWAAAFG RQEAVHSGTF MGIAPTGKRV EIRYMDFWKV VDGKIVDNWV MVDFPHVLAQ LGRDVFAGEG WEAFDRGEKV PPAP
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