Gene Dshi_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1417 
Symbol 
ID5712593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1470855 
End bp1471379 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content67% 
IMG OID641267329 
Productprotein of unknown function DUF1486 
Protein accessionYP_001532760 
Protein GI159043966 
COG category[R] General function prediction only 
COG ID[COG5485] Predicted ester cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.289435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGGG CGCGTCCGGA GCAGGCGGTT CTGAGCCGGG ACACGGACAT GAGCCGGACC 
GCCGCGACCC GCGCGGTGAT CGAGGGGATG GTCGACGGGC TGAACGATCA CAGGATCGCG
GATATCGGGG AGTTTTTCGC CGAGGGCTTC GGCTGGCATG GCAACCGGGG GTGCGGGACC
AAGCGGGGTC TGCGGGAGTT TCAGGAGAAC TGGCAGAAAC CGTTCCAGGC GGCGTTTTCC
GACAAGGTCT GCATCGACGA GGCGCGGCTC TACATGGGCG AGTGGGCGGC GGCCTTCGGG
CGGCAGGAGG CGGTGCATTC GGGCACGTTC ATGGGGATCG CGCCCACGGG CAAGCGGGTG
GAGATCCGCT ACATGGATTT CTGGAAGGTG GTGGACGGCA AGATCGTCGA CAACTGGGTC
ATGGTAGATT TTCCCCATGT GCTGGCGCAG CTGGGCCGGG ACGTCTTCGC GGGCGAGGGC
TGGGAGGCGT TCGACCGGGG CGAGAAGGTG CCGCCGGCCC CTTAG
 
Protein sequence
MSGARPEQAV LSRDTDMSRT AATRAVIEGM VDGLNDHRIA DIGEFFAEGF GWHGNRGCGT 
KRGLREFQEN WQKPFQAAFS DKVCIDEARL YMGEWAAAFG RQEAVHSGTF MGIAPTGKRV
EIRYMDFWKV VDGKIVDNWV MVDFPHVLAQ LGRDVFAGEG WEAFDRGEKV PPAP