| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1399 |
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| Symbol | acsA |
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| ID | 5712575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1451413 |
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| End bp | 1453374 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641267311 |
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| Product | acetate--CoA ligase |
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| Protein accession | YP_001532742 |
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| Protein GI | 159043948 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.570682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.412853 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGACA ACAAAGACGG CGTCTACACG CCGAGCGCCG ATTTCGTGAA GAACGCCCAT
ATCGATTCAT CGAAGTATTC TGAGATGTAT GCGGCGTCGG TTTCGGATCC TGAGGGGTTT
TGGGGGGAGC ATGGGCGGTC TTTGGACTGG ATCAAGCCCT ACACGAAGGT GAAGGACACC
TCGTTCGCCC ATGACGACGT GCATGTGCGC TGGTTCGAGG ATGGCACGCT GAACGTGGCG
GCCAATTGCA TCGACCGGCA TCTGGCGACC CGGGGCGATC AGACCGCGAT CATTTTCGAG
CCGGACGATC CCGCCGAGCC TGCCCAGCAC ATCACCTATC GCGAGTTGCA CCGGCAGGTC
TGCAAGCTGT CCAACGTGCT GGAGGATCTC GGCGTGCGCA AGGGCGACCG GGTGATCCTT
TACATGCCGA TGATCCCCGA GGCGGCCTAT GCGATGCTGG CCTGTGCCCG GATCGGCGCG
ATCCATTCCA TTGTTTTCGC GGGCTTTTCG CCCGATGCCC TCTCGGCGCG GATCAACGGG
GCCGATGCCA GGCTGCTGAT CACCGCGGAC TATGCCCCCC GGGGCGGGCG CCAGACGCCG
CTGAAATCCA ACGCCGACGC GGCGCTCTTG CACACCCGCG ACGACGTCAA GATGCTGGTG
GTCAAGCGCA CCGGCGGGCA GACCACCTGG GTGGACGGGC GCGATTTCGA CTATCACGAG
CTGATGCTGG AGGCCGACGA GGTCCAGCAC CCGGTCGAGG TGGAGGCCGA GCATCCGCTC
TTCATCCTCT ATACCTCGGG CTCCACGGGC CAGCCCAAGG GGGTGGTGCA TTCCTCGGGG
GGCTACCTGC TCTATGCGGC GATGACCCAG AAATACGTCT TCGACGTGCA TGAGGGCGAT
GTCTACTGGT GCACGGCGGA TGTGGGCTGG GTGACGGGGC ACAGCTATAT CGTCTACGGG
CCGCTGGCCA ATGGCGGCAC CACGGTGATG TTCGAGGGCG TGCCGACCTA CCCCGATGCC
TCCCGCTTCT GGCAGGTCTG CGACAAGCAC AAGGTCACCC AGTTCTACAC CGCCCCCACC
GCGATCCGGG CGCTGATGGC CAAGGGGCCG GAATTCGTCG AGACATGCGA CCTGAGCAGC
CTGCGCGTCC TCGGCACCGT GGGCGAGCCG ATCAACCCCG AGGCCTGGAA CTGGTACAAC
GACCTGGTCG GCAAGGGCCG CTGCCCGATC GTCGACACCT GGTGGCAGAC CGAGACCGGC
GGGCACCTGC TGACGCCGCT GCCCGGCGCG ATCGCGACCA AGCCGGGCTC GGCGACCCTG
CCGTTCTTCG GGGTGCAGCC GGTGGTGCTC GACCCCCATT CGGGCGCCGA GATCACCGAG
ACCGAATGCG AGGGGGTGCT GTGCCTCAAG GACAGCTGGC CGGGCCAGAT GCGCACGGTC
TACGGCGACC ACGAGCGGTT CGTGAAGACC TATTTCTCGG ACTACAAGGG GTATTACTTC
TCGGGCGATG GCTGCCGCCG GGACGCGGAC GGGTATTACT GGATCACCGG CCGGGTCGAT
GACGTGATCA ACGTGTCGGG CCACCGGATG GGCACGGCGG AGGTGGAATC GGCGCTCGTG
GCCCATGCCA AGGTCGCCGA GGCCGCGGTC GTGGGCTATC CGCACGACAT CAAGGGCCAG
GGCATCTATT GCTACGTCAC CCTGATGAAT GGCGAGGAGC CCTCCGAGGA GCTGCGCAAG
GAGCTGCGCA CCTGGGTGCG CACCGAGATC GGCCCCATCG CCGCCCCGGA CCTGATCCAG
TGGGCCCCCG GCCTGCCGAA AACCCGGTCG GGCAAGATCA TGCGCCGCAT CCTGCGCAAG
ATCGCCGAAG ACGACTTCGG AGCCTTGGGC GACACCTCAA CCCTCGCAGA CCCCTCCGTC
GTCGAAGACC TCATCGAAAA CAGAATGAAC AAGAAAGGAT GA
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| Protein sequence | MLDNKDGVYT PSADFVKNAH IDSSKYSEMY AASVSDPEGF WGEHGRSLDW IKPYTKVKDT
SFAHDDVHVR WFEDGTLNVA ANCIDRHLAT RGDQTAIIFE PDDPAEPAQH ITYRELHRQV
CKLSNVLEDL GVRKGDRVIL YMPMIPEAAY AMLACARIGA IHSIVFAGFS PDALSARING
ADARLLITAD YAPRGGRQTP LKSNADAALL HTRDDVKMLV VKRTGGQTTW VDGRDFDYHE
LMLEADEVQH PVEVEAEHPL FILYTSGSTG QPKGVVHSSG GYLLYAAMTQ KYVFDVHEGD
VYWCTADVGW VTGHSYIVYG PLANGGTTVM FEGVPTYPDA SRFWQVCDKH KVTQFYTAPT
AIRALMAKGP EFVETCDLSS LRVLGTVGEP INPEAWNWYN DLVGKGRCPI VDTWWQTETG
GHLLTPLPGA IATKPGSATL PFFGVQPVVL DPHSGAEITE TECEGVLCLK DSWPGQMRTV
YGDHERFVKT YFSDYKGYYF SGDGCRRDAD GYYWITGRVD DVINVSGHRM GTAEVESALV
AHAKVAEAAV VGYPHDIKGQ GIYCYVTLMN GEEPSEELRK ELRTWVRTEI GPIAAPDLIQ
WAPGLPKTRS GKIMRRILRK IAEDDFGALG DTSTLADPSV VEDLIENRMN KKG
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