Gene Dshi_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1307 
SymbolnuoA 
ID5711865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1360930 
End bp1361295 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content58% 
IMG OID641267219 
ProductNADH dehydrogenase subunit A 
Protein accessionYP_001532650 
Protein GI159043856 
COG category[C] Energy production and conversion 
COG ID[COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.269341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0520931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAGAGT TGCTTCGAGA ATACCTTCCG ATCCTTGTTT TCCTGGCGAT TGCCATCGGA 
TTGGGCCTTG TCCTGATCCT CGCTGCGGTG ATCCTCGCGG TGCGCAATCC GGACCCCGAG
AAGGTGTCGG CCTATGAGTG CGGGTTCAAC GCCTTCGACG ATGCGCGGAT GAAGTTCGAC
GTGCGCTTCT ACCTGGTGGC GATTCTCTTC ATCATCTTCG ATCTGGAGGT CGCGTTCCTC
TTCCCCTGGG CGGTGGCGTT CCAGGATGTG GGGGTCGTCG GGTTCTGGAG CATGATGGTT
TTCCTGGCGG TCCTGACGAT CGGGTTCGCC TACGAATGGA AAAAAGGAGC CCTCGAATGG
GAGTGA
 
Protein sequence
MEELLREYLP ILVFLAIAIG LGLVLILAAV ILAVRNPDPE KVSAYECGFN AFDDARMKFD 
VRFYLVAILF IIFDLEVAFL FPWAVAFQDV GVVGFWSMMV FLAVLTIGFA YEWKKGALEW
E