| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1303 |
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| Symbol | mvaB |
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| ID | 5711861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1357972 |
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| End bp | 1358835 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641267215 |
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| Product | hydroxymethylglutaryl-CoA lyase |
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| Protein accession | YP_001532646 |
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| Protein GI | 159043852 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.15453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0935443 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCATG CGGTCGAGAT CGTCGAGGTC GGCCCGCGCG ACGGTTTGCA GAACGAGCCG
GGGGTGATCG CGACCGCGCG GAAGGTCGCC CTGGTCGATA CGCTGAGCCG CGTCGGCTTC
CGGCGGATCG AGGTGGCGAG CTTCGTCAGC CCGAAATGGG TGCCGCAGAT GGCCGATAGC
GCCGAGGTGC TGGCCGGGAT CGCCCGCGCG CCGGGGGTGC GGTACGGCGC GCTGGCGCCG
AACCTGCGCG GGTTCGAGGC GGCCCTGGCC GCGCAGGCCG ACGAGGTGGC GATCTTCGGG
GCGGCGAGCG AGGGGTTCTC GCAGGCCAAT CTGAACTGTT CGATCGACGA GAGCTTTGCG
CGGTTCGCGC CGATCTGCGC GGCGGCGGCG GAGGCCGCGC TGCCGGTGCG GGGGTATGTT
TCCTGCGTGA CGGAGTGCCC CTATGACGGC CCGACCCCGC CCGAGGCGGT CGCGCGGGTG
GCCGCGCGCC TGCGGGCGCT GGGATGCTAC GAGGTCTCGC TGGGCGAGAC GCTGGGGCGC
GCGACCCCTC GGGCGGTGGC GCGGATGCTG GAGGCCGTGC TGGCGGAGCT GCCCGCGGCG
GAGCTGGCCG GGCATTTCCA CGACACCGCC GGGCGGGCCC TGGCCAATAT CGATGCCGCA
CTCGACGCGG GGCTGCGGGT CTTCGATGCC TCCGCCGGGG GGCTGGGGGG CTGTCCCTAT
GCGCCCGGAG CGGCGGGCAA CGTGGCGACC GAGGCCGTGG CGGCGCATCT CGCGGCGGCC
GGTTACGAGA CCGGGCTCGA TCGCGACGCG CTGGACCGGG CGGCGCAGAT GGCGCGGGCC
CTGCGCCGAA AGGAGCGCGC ATGA
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| Protein sequence | MSHAVEIVEV GPRDGLQNEP GVIATARKVA LVDTLSRVGF RRIEVASFVS PKWVPQMADS
AEVLAGIARA PGVRYGALAP NLRGFEAALA AQADEVAIFG AASEGFSQAN LNCSIDESFA
RFAPICAAAA EAALPVRGYV SCVTECPYDG PTPPEAVARV AARLRALGCY EVSLGETLGR
ATPRAVARML EAVLAELPAA ELAGHFHDTA GRALANIDAA LDAGLRVFDA SAGGLGGCPY
APGAAGNVAT EAVAAHLAAA GYETGLDRDA LDRAAQMARA LRRKERA
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