| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1261 |
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| Symbol | gltS |
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| ID | 5711819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1308092 |
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| End bp | 1309300 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641267173 |
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| Product | sodium/glutamate symporter |
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| Protein accession | YP_001532604 |
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| Protein GI | 159043810 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0786] Na+/glutamate symporter |
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| TIGRFAM ID | [TIGR00210] sodium--glutamate symport carrier (gltS) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.332542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACC TTCTCGTACC CGCTTTCATC TCGGTCACGC TGGGCTTGCT GGTCTATTTC
ATTGGTGCGT TCTTGACCCG CAAGGTGCAG TTCCTGAAGG ACTATAACAT TCCCGAGCCG
GTCTCGGGCG GGTTGGCCAT AGCTCTCGTC ACCTGGGCGT TCTTCGCACT CACCGGGCGC
CAGATCGTGT TCGACCTGGC GGTGCGGGAC TACCTGCTGG TGCTGTTCTT CTCGACCATC
GGCTTGAACG CGCGGCTTGC CGACCTGTTG CGCGGGGGTC GGTTGCTGCT GGTGTTGCTC
GGGCTGACCG TGGGGTTCAT GGTGCTCCAG AACCTCGTGG GGCTTGTCGG CACGATCCTG
TTCGATCTGC CCACGCCGAT GGCGGTGTTG CTCGGCTCGG CCGCGTTGAT CGGCGGGCAC
GGTACGGCGA TTGCCTGGGG CCCCGAAATC GAAGAGGTCA CGGGCTTCGC CGCCGCCGCG
GAGGTCGGGA TCGCCGCAGC CACCCTTGGG TTGGTGTTCG CGGCCCTGAT CGGCGGGCCG
ATTGCAAAAC GGCTGATCGA TCGCAACGGG CTCAGCGGTG AGGAGGGCGC CGCCCCGGTG
GTAGGGCTGG AATTCGAAGA ACCCGGTGAG GCGCCGGAGG TGGTCAACCA TGTCAGCCTG
ATGCGGTCCA TGCTGGCCGC CCACGTGGCG ATCCTGCTGG GCTTCCTCGC GCATGGCGCG
ATTGCCGCGG CGGGCGTGAT GCTGCCGCTC TTCGTGCCGT GTCTGCTGGT GGGGATCGTC
ACGTCGAACA CCATCCCGTA TCTCTTTCCG CGCCTGACCT GGCCCGCAGG CAGCCGGGCG
CTGGCGGTGG TGTCGGATTA CAGCCTATCG GTTTTCCTCG CCATGTCGCT GATGAGCATG
CAGCTGTGGA CCCTAACGGA GCTTGGCGGG CCGTTGCTCG GGGTTCTGGC GATGCAGGTG
GCCATGACGG TGGCCTTCAT CCTGCTGGTC GTGTTCGCCG CCCTGGGGCG CAATTTCACT
GCCGCGGTGC TGAGCGCGGG GTTTGCCGGG TTCGCCCTTG GCGCGACCCC CACGGCGATT
GCCAACATGT CCTCGGTCAC CAAGCGCTAC GGACCCGCGC CGCTGGCCTT CATCGTGCTG
CCGCTGGTCT CGGCCTTTTT CGTAGACCTG GCCAACGCGG TCATCATCCA GGTCTTTGTC
GGGCTCTGA
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| Protein sequence | MPDLLVPAFI SVTLGLLVYF IGAFLTRKVQ FLKDYNIPEP VSGGLAIALV TWAFFALTGR
QIVFDLAVRD YLLVLFFSTI GLNARLADLL RGGRLLLVLL GLTVGFMVLQ NLVGLVGTIL
FDLPTPMAVL LGSAALIGGH GTAIAWGPEI EEVTGFAAAA EVGIAAATLG LVFAALIGGP
IAKRLIDRNG LSGEEGAAPV VGLEFEEPGE APEVVNHVSL MRSMLAAHVA ILLGFLAHGA
IAAAGVMLPL FVPCLLVGIV TSNTIPYLFP RLTWPAGSRA LAVVSDYSLS VFLAMSLMSM
QLWTLTELGG PLLGVLAMQV AMTVAFILLV VFAALGRNFT AAVLSAGFAG FALGATPTAI
ANMSSVTKRY GPAPLAFIVL PLVSAFFVDL ANAVIIQVFV GL
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