| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1259 |
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| Symbol | |
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| ID | 5711817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1305092 |
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| End bp | 1307596 |
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| Gene Length | 2505 bp |
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| Protein Length | 834 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641267171 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001532602 |
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| Protein GI | 159043808 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase
[COG2608] Copper chaperone |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.499676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAC CCATGACCGT TTCGCTGTCC CTTACGGGAA TGACCTGTGC GTCCTGCGTC
GGGCGGGTCG AGCGTGCCCT GGCCGAACGC CCTGGTGTGC GCGATGTGTC GGTGAACCTG
GCTACCGAGA CCGCGCGGAT GACGCTGGCG CAGCCGGATG CCTTGCCGGA TCTGGTCGAG
ATGCTGACCA CCAGGGGATA CGCGCCGCGG GAGGCCACCA TTTCGTTGCG CGTGGCCGAG
ATGTCCTGCG CCTCCTGCGT CGGGCGGGTG GAGCGGATCC TGCAGGCGGA GCCGGGTGTT
CTGGAGGCCT CGGTCAACCT GGGCACCGAA ACCGCGACCG TGCGGGTGCT CGACGGGGTG
ACTAGCCCTG CACGGCTGAT CGCGCGGTGC AGCGAGGGCG GGTTTCCCGC GCGTTTGGCG
GCGACCGATG AAGCGCCCGC CCGTGCGCAG CGCCAGCGGG ACGAAGCCGA GGCGATGGCG
CGCAGGGTGG CAGGGGCCGC GGCGCTGGCC CTGCCGGTCT TCATCCTGGA GATGGGCAGT
CACATGGTGC CCGCCTTTCA TCACTGGATC ATGGCGACCA TCGGGATGCA GACCTCGTGG
CTTCTGCAAT TCGTGCTGAC CAGCCTGGTT CTTTTCGGCC CCGGGCGGCT GTTTTTCGTC
AAGGGCGCGC AAAGCCTTGC CCATGGGACG CCGGACATGA ATGCGCTGGT GGCGCTGGGG
ACCGGAGCGG CCTGGTCCTA TTCGGTGGTG GCGACCTTCT TCCCCGCGCT GCTGCCAGAG
GCGAGCCGTG CGGTCTATTT CGAGGCTGCC GCGGTGATCG TGGTGCTGAT CCTCGTGGGA
CGCTGGCTGG AGGCGCGCGC CAAGGGCCGC ACCGGGGCCG CCATCGAGGG CTTGCTCGGT
TTGCAGGTCA AGACCGCCCG GTTGATCCGG GGCGACGACA TCGCCGAAGT GCCGGTAGAG
GCGCTGGGGC CCGGGGACCA TGTTCTGGTG CGCCCGGGGG AGCGGTTGCC GGTCGATGGC
ACCGTGATCG CGGGCACGAG CAATGTGGAC GAGAGCATGA TCACCGGCGA GCCGATGCCC
GTACCGAAAG CCGCTGGCGC CGAGGTGACG GGCGGCACGG TCAACGGCAC CGGCAGCCTG
AGCGTCGCGG TTACGCGCAC GGGGGGCGAC ACGGTGCTGG CGCAGATCAT TCGTATGGTC
GAACAGGCCC AGGGCGCCAA GCTGCCGATC CAGGGGCTGG TCGACCGGGT GACCCTGTGG
TTCGTGCCGA TCGTCCTGGG GATCGCGGCG CTGACGGTCG CGGTCTGGCT CGCGCTCGGG
CCGGGGCTGG GTTTTGCGCT CGTGGCCGGG GTGTCGGTGC TGATCATCGC GTGCCCCTGT
GCCATGGGCC TGGCGACGCC GACCTCGATC ATGGTCGGCA CCGGCCGTGC GGCGGAGATG
GGGGTTCTGT TCCGCAAGGG CGATGCGCTG CAGGCGCTGG CGGATGTGGA CATGATCGCG
CTCGACAAGA CCGGCACCGT GACCGAAGGC CGTCCCGTGC TGACCGACCT CGAACTTGCG
ACAGGCTGGG CGCGCGCCGA AGTGCTCGCC CTGATGGCGG GGGTCGAGAT GGCGTCGGAG
CATCCCGTGG GCGCGGCGGT CGTGCGCGCG GCCCGCGGCG AAGGGGTCGT GCCCGAGAGG
GCAACGGATG TTGAAAGCCA CACCGGGCGC GGTATCTCCG GCACGGTGTC GGGGCGGCGC
GTCCTCGTCG GCACCGCCCG CCTGATGGCG GAGGAGGGGG TCGAGACCGG GCGGTTGGCC
GAACGGGCCG CCGCCCTCGC AGAGCAGGGC CATACGGTGT TCTTCGTCGC GGTCGAGGGG
GCACTGGCGG CGATTGCCGC GGTCTCCGAC CCCATAAAGC CGACGAGCAA GGCAGCGATT
GCTGCGCTCA AGACGCAGGG CGTTGATGTC GCGCTGATCA CCGGGGATAA CGAAGGTACC
GCCCGCGCCG TGGCCCGTGC CGTCGGCATC GACCACGTGG TGGCGGGCGT TCTGCCCGAG
GGCAAGGTCG CCGCCCTCGA AGCGATGCGC GCCGAGGGTC GCAAGCTGGC CTTCGTCGGC
GACGGAATCA ACGACGCCCC GGCACTGGCC CATGCGGATG TGGGTGTGGC GATCGGGACG
GGCACGGATA TCGCGATCGA GAGCGCGGAT GTGGTGCTGA TGTCCGGGGA CCTGCGCGGC
GTGGTCAATG CGCGCGACGT GTCGCGGCGG ACCATGCGCA ACATCAAGCA GAACCTCGGC
TGGGCCTTCG GCTACAACGC CGCGCTGATC CCGGTGGCGG CCGGGGTGCT CTATCCGGCG
TTCGGCATCC TTCTGTCGCC GATCTTCGCA GCGGGGGCCA TGGCGCTGTC GTCGGTGTCG
GTCCTGGGCA ACGCGCTGCG GCTGCGCCGT GTCCGCCCGC AACAAAGCAT GGACACCCAG
GGCCCGCAGG GCGCCGTGGC CGCGGAGCCG CAACCGGCGG AATGA
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| Protein sequence | MSEPMTVSLS LTGMTCASCV GRVERALAER PGVRDVSVNL ATETARMTLA QPDALPDLVE
MLTTRGYAPR EATISLRVAE MSCASCVGRV ERILQAEPGV LEASVNLGTE TATVRVLDGV
TSPARLIARC SEGGFPARLA ATDEAPARAQ RQRDEAEAMA RRVAGAAALA LPVFILEMGS
HMVPAFHHWI MATIGMQTSW LLQFVLTSLV LFGPGRLFFV KGAQSLAHGT PDMNALVALG
TGAAWSYSVV ATFFPALLPE ASRAVYFEAA AVIVVLILVG RWLEARAKGR TGAAIEGLLG
LQVKTARLIR GDDIAEVPVE ALGPGDHVLV RPGERLPVDG TVIAGTSNVD ESMITGEPMP
VPKAAGAEVT GGTVNGTGSL SVAVTRTGGD TVLAQIIRMV EQAQGAKLPI QGLVDRVTLW
FVPIVLGIAA LTVAVWLALG PGLGFALVAG VSVLIIACPC AMGLATPTSI MVGTGRAAEM
GVLFRKGDAL QALADVDMIA LDKTGTVTEG RPVLTDLELA TGWARAEVLA LMAGVEMASE
HPVGAAVVRA ARGEGVVPER ATDVESHTGR GISGTVSGRR VLVGTARLMA EEGVETGRLA
ERAAALAEQG HTVFFVAVEG ALAAIAAVSD PIKPTSKAAI AALKTQGVDV ALITGDNEGT
ARAVARAVGI DHVVAGVLPE GKVAALEAMR AEGRKLAFVG DGINDAPALA HADVGVAIGT
GTDIAIESAD VVLMSGDLRG VVNARDVSRR TMRNIKQNLG WAFGYNAALI PVAAGVLYPA
FGILLSPIFA AGAMALSSVS VLGNALRLRR VRPQQSMDTQ GPQGAVAAEP QPAE
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