Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1213 |
Symbol | coxD |
ID | 5711771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1252829 |
End bp | 1253737 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641267125 |
Product | ATPase associated with various cellular activities AAA_5 |
Protein accession | YP_001532556 |
Protein GI | 159043762 |
COG category | [R] General function prediction only |
COG ID | [COG0714] MoxR-like ATPases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0634227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.99414 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGTTTC ACCCTCCATC CAGGCAAGGA ATGACAGACT GGACATCTCT TCAGACCGCG ATGGCGGAGC ACGGCTATGT CGCCTCCGAC GACCTGGCCA TGGCGCTGCA TATCGCCCGG TCGCTCGGGC GGCCATTGCT GCTCGAGGGC GCGGCAGGCG TCGGCAAGAC CGAGGTCGCC CGCGTGCTTG CGGCGGTCGA GGATACGCGG CTGATCCGGC TGCAATGCTA CGAGGGGCTC GATGCCTCCC ACGCGATCTA TGAATGGAAC TACCCGCGGC AGTTGCTGGC CATTCGCGCC GCCGCCGAGG ACGGCGAGAG CGCGCGGGCG GCGGAGACGC GGGTATTCTC CGAAGACTAC CTGCTCGAAC GGCCCCTGCT GGCGGCGATC CGGCAGGACC GCGCGCCGGT GCTACTGATC GACGAGATCG ACCGGGCGGA TGAGGAGTTC GAGGCCTATC TGCTGGAGGT GCTGTCGGAG TTCCAGATCA CCGTGCCGGA GCTGGGCACG CTCACCGCGG TCACGCGACC CACGGTGATC CTGACGGCCA ACGGCACGCG GGATCTCAGC GACGCGCTGC GCCGCCGCTG CGTTTACGCC TACGTCGAGT ATCCCAGCCG CGAGGTGGAG CTGTCGATCC TGCTCGCGCG CTGCCCCGAG ATCGCCGACC AGCTGGCTGC GCAGATCGTC GGCTTCGTGC AGGCCGTGCG CCGGGAGGAC CTGGAAAAGA AACCGGGCAT CGCCGAGATG CTGGATTTCG CCGCCGCCCT GTCGGGCCTC GGCATCGCCG ATCTGAACGA CGACCCCGTG GTTCTGGGCG CGACCCTCGC CACCCTGCTG AAAACCCGCC AGGACCGCGA CACCCTGTCG GTCGAGGTGG CCCAACGGCT CGCGGGGAAG GCGGCGTGA
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Protein sequence | MGFHPPSRQG MTDWTSLQTA MAEHGYVASD DLAMALHIAR SLGRPLLLEG AAGVGKTEVA RVLAAVEDTR LIRLQCYEGL DASHAIYEWN YPRQLLAIRA AAEDGESARA AETRVFSEDY LLERPLLAAI RQDRAPVLLI DEIDRADEEF EAYLLEVLSE FQITVPELGT LTAVTRPTVI LTANGTRDLS DALRRRCVYA YVEYPSREVE LSILLARCPE IADQLAAQIV GFVQAVRRED LEKKPGIAEM LDFAAALSGL GIADLNDDPV VLGATLATLL KTRQDRDTLS VEVAQRLAGK AA
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