| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1210 |
|---|
| Symbol | coxM |
|---|
| ID | 5711768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 1249012 |
|---|
| End bp | 1249866 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641267122 |
|---|
| Product | molybdopterin dehydrogenase FAD-binding |
|---|
| Protein accession | YP_001532553 |
|---|
| Protein GI | 159043759 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0358548 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.452165 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATACCAC CGGCCTTTGA ATACCATCGG CCGACGGACC TCGCGTCCGC GGTGAGCGTT
TTGCAGGAAC ATGGCGACGA GGCGCGGTGC CTCGCGGGCG GGCACAGCCT GATCCCGATG
ATGAAGCTGC GCATGGCCGC GGTGGAACAC CTGGTCGATC TGCAGGACAT CGCCGAGCTG
CGCGAGATCC GGGTCGAGGG CGGTCGGGTG ACCCTGGGGG CCATGGTCAC GCAACACGCG
CTGATCACCT CCGACGCGCT GGCCTCCGCC GCGCCGCTGC TGCGCGAGGC GGCCGAGCAG
ATCGCCGACC CGCAGGTCCG CTACATGGGC ACGGTGGGTG GCAATGTCGC CAATGGCGAT
CCGGGCAATG ACATGCCGGG GCTGATGCAG GCGCTCGATG CGAGTTTCAC CCTGATGGGG
CCGGACGGCA CCCGCGAGGT TGCGGCGCGG GACTTCTTCG AGGGGGCCTA TACCACCACC
CGTGAAGACG AGGAAATCCT GACCCAGATC GCCTTCGATG CCCATGCCAA GGGCTACGCC
TATGAGAAGC AGAAGCGCAA GATCGGCGAT TATGCCACCG CCGCCGCCGC CGTCCTGATC
GAGAAGGACG GCACGGTCGC GGGCAAGGTC GACATCGCCA TGACCAACCT GAGCGACACG
CCGGTGTATT CCGCCGCCGC GGGCGCTGCG CTGGTTGGCA CGAGTTGCGA CGCGGAGGCG
GTCAAGGCCG CCGTCACCGC GATGCTCGAA GACATCGACC CGATGCCCGA CAACCGCGGG
CCGGTGGAAT TCAAACGCCA TGTTGCGGGC GTCATCCTGG GCCGGGCCAT CGCCCGGGCC
TGGTCGCGCG CATAA
|
|---|
| Protein sequence | MIPPAFEYHR PTDLASAVSV LQEHGDEARC LAGGHSLIPM MKLRMAAVEH LVDLQDIAEL
REIRVEGGRV TLGAMVTQHA LITSDALASA APLLREAAEQ IADPQVRYMG TVGGNVANGD
PGNDMPGLMQ ALDASFTLMG PDGTREVAAR DFFEGAYTTT REDEEILTQI AFDAHAKGYA
YEKQKRKIGD YATAAAAVLI EKDGTVAGKV DIAMTNLSDT PVYSAAAGAA LVGTSCDAEA
VKAAVTAMLE DIDPMPDNRG PVEFKRHVAG VILGRAIARA WSRA
|
|---|
| |