| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1133 |
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| Symbol | |
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| ID | 5711101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1158693 |
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| End bp | 1159541 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641267044 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001532476 |
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| Protein GI | 159043682 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAGA CACCCCTTTC CGCCTCGGTC GCGGCGTTTC TGGCGCTGGC TGCCGGGCTG
ACCGACGCGG CCGCGCAGGC CACAGAGGCG ACTCGGCCTC CCCCTGCGGC TGAATTCACC
TTCAAGAAGA TCACGCCCCC TGCGCCCGGG GCGAGCCGCC GGATCACCGT GCAGATCGTA
CCGACCGTTC CGCCACCGGC TCCGGCGCTG GCCACGCCCG GGGATCAGCC CGCGCGGCCC
CAACCGAACG AAGATCCCGC AGTGGGGGCG TTCTGGTCTG CTACGGGGAC CGAGTTGCAG
ACCGCCAATC CGGCCCGGTT CCTCACAGCC GTGGATTTTG TCACGGGCGA CGGGGGGCGT
GATCTGCCGA CCCCGGGCCT CGCGACCCTG CAAGGGCTCG CCGCCGCCCA TGGTCGGACC
ATTCTGGCCA GCACGATCGG CACGCGGGTC TCTCCGGCGC TTGTCCTGTC AGTGATGGCG
GTGGAATCCT CCGGTCGGCC CGACGCGGTC AGCCCCAAGG GCGCGCAGGG CCTGATGCAG
CTGATCCCGG CTACCGCCGC GCGGTTCGAC GTGGACGACC CGTTCGATCC GGCCGATAAC
ATCGCCGGGG CGGTGCGCTA CCTCGACTGG CTTATGGGCA CGTTCGACGG CGATGCGATC
CTGGCGCTGG CGGGCTACAA TGCCGGGGAG AACGCGGTGA AAGGGGCAGG CGGTGTCCCC
GACTACCCTG AGACACGGGC TTACGTGCCC AAGGTGCTGG CGGCCTGGCG CGTGGCGCGC
AGCTTGTGCG CGTCACCGCC GCAACTGGCA TCGGATGGCT GCGTCTTCAC CACGATGGCC
GTGAACTGA
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| Protein sequence | MAQTPLSASV AAFLALAAGL TDAAAQATEA TRPPPAAEFT FKKITPPAPG ASRRITVQIV
PTVPPPAPAL ATPGDQPARP QPNEDPAVGA FWSATGTELQ TANPARFLTA VDFVTGDGGR
DLPTPGLATL QGLAAAHGRT ILASTIGTRV SPALVLSVMA VESSGRPDAV SPKGAQGLMQ
LIPATAARFD VDDPFDPADN IAGAVRYLDW LMGTFDGDAI LALAGYNAGE NAVKGAGGVP
DYPETRAYVP KVLAAWRVAR SLCASPPQLA SDGCVFTTMA VN
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