| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1115 |
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| Symbol | ftsH |
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| ID | 5711083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1139764 |
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| End bp | 1141680 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641267026 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_001532458 |
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| Protein GI | 159043664 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.48117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.272437 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCAATT TGCGAAACGT CGCGTTCTGG GTTGTGCTGT TCCTGCTCAT CCTGGCCCTG
TTCAACCTGT TCAGCGGGGG GCAATCGACG GTCAACTCGC GGGCCATCAC CTATTCCGAA
TTCGTGGACC GCGTCGAGCA AGGCGATGTC GCCAGCGTCG TTCTCGATGG CGAGAATGTC
ACCATGCGCA CTGGCGACGG GCAGCAGCTG ACCACCGTGA AGCCCGAAGG GGTGGACGTG
ACCGGACTGC TTCTGGAGGA AAATGTCCAG ATCGAGGCCC GCGCCCAGGA GCAGAGCGGC
ATCCTGTCCT ATATCGGCAC GCTGCTGCCC TTCCTGATCC TGATCGGTAT CTGGATCTTC
TTCATGAACC GGATGCAGGG CGGCGGACGG GGCGGGGCCA TGGGCTTCGG CAAGTCCAAG
GCGAAACTGC TGACCGAAAA GCAGGGGCGC GTGACCTTCG ATGACGTTGC TGGCATCGAC
GAGGCAAAGG ACGACCTCGA AGAGATCGTG GAGTTTCTGC GCAATCCGCA GAAATTCTCG
CGGCTGGGGG GCAAGATCCC GAAAGGCGCA CTGCTTGTCG GACCTCCGGG CACTGGTAAG
ACGCTGCTTG CGCGCGCCGT TGCGGGCGAG GCGGGTGTGC CCTTCTTCAC CATCTCGGGC
TCCGACTTCG TCGAGATGTT CGTGGGCGTC GGCGCCAGCC GGGTGCGCGA CATGTTCGAG
CAAGCCAAGA AGAATGCGCC CTGCATCGTC TTCATCGACG AGATCGACGC CGTGGGCCGG
TCCCGTGGCG TGGGCTATGG CGGCGGCAAT GACGAGCGCG AACAGACCCT CAACCAGCTG
CTGGTCGAGA TGGACGGGTT CGAGGCCAAC GAGGGGATCA TCATCGTGGC GGCGACCAAC
CGTCCGGACG TGCTCGACCC TGCACTGCTG CGCCCGGGCC GGTTCGACCG CCAGGTCCAG
GTCCCGAACC CGGACATCAA GGGGCGCGAG AAGATCCTGG GCGTCCACGC CCGCAAGGTG
CCGCTGGGCC CCGATGTGGA TCTGCGCATC ATCGCGCGCG GCACGCCCGG TTTTTCCGGC
GCGGATCTCG CCAACCTCGT GAACGAGAGC GCGCTGATGG CGGCCCGTGT CGGACGCCGC
TTCGTGACCA TGGAGGATTT CGAATCCGCC AAGGACAAGG TGATGATGGG GGCAGAGCGT
CGGTCCATGG TCATGACCGA GGAAGAAAAG GCTCTGACCG CCTATCACGA GGCGGGCCAC
GCGATTGTCG GCCTGAACGT GCCGCAGCAT GACCCGATCC ACAAGGCGAC GATCATCCCG
CGCGGCCGGG CCCTCGGTTT GGTGATGTCC CTGCCGGAGC GCGATCAACT GAGCGTGACC
AAGACCAAGT ACATCTCGAA AATCGCCATG GCGATGGGCG GCAAGGTGGC GGAAGAGCTG
AAATTCGGAC CGGAGAATGT GACCTCGGGG GCGACCTCGG ACATTCAGCA GGTCTCGAAG
ATCGCACGGG CCATGGTGAC CCAGTTCGGC TTTGCCGAGG AATTGGGCCA TGTGGATTAT
GCCAACGAAC AGCAGTCCTA CCTGGGCAGC TATGGTGGCG GTACCAATCA CAGCCAGGAA
ACCCAGAAGA TCATCGACCA AAAGGTCAAG GAGATCATCG ACGAAGGCTA CAACACGGCC
AAGCGCATCC TGACCGAGAA GAAGGACGAG TGGGAACGTC TGGCCCAGGG CCTGCTGGAA
TACGAGACCC TGACCGGGGC GGAGATCCAG AAGGTGATCA ACGGCGAGCC GCTGAACCGC
GGCGATGACG AGGACGATAC CCCGACCTCG GGCACCCCAT CGGTCACGGC GATCCCGAAA
GCCAAGTCCC GCTCCAAGCC ACGCGACGGC GGAATGGAAC CCGAACCGAG CACCTGA
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| Protein sequence | MGNLRNVAFW VVLFLLILAL FNLFSGGQST VNSRAITYSE FVDRVEQGDV ASVVLDGENV
TMRTGDGQQL TTVKPEGVDV TGLLLEENVQ IEARAQEQSG ILSYIGTLLP FLILIGIWIF
FMNRMQGGGR GGAMGFGKSK AKLLTEKQGR VTFDDVAGID EAKDDLEEIV EFLRNPQKFS
RLGGKIPKGA LLVGPPGTGK TLLARAVAGE AGVPFFTISG SDFVEMFVGV GASRVRDMFE
QAKKNAPCIV FIDEIDAVGR SRGVGYGGGN DEREQTLNQL LVEMDGFEAN EGIIIVAATN
RPDVLDPALL RPGRFDRQVQ VPNPDIKGRE KILGVHARKV PLGPDVDLRI IARGTPGFSG
ADLANLVNES ALMAARVGRR FVTMEDFESA KDKVMMGAER RSMVMTEEEK ALTAYHEAGH
AIVGLNVPQH DPIHKATIIP RGRALGLVMS LPERDQLSVT KTKYISKIAM AMGGKVAEEL
KFGPENVTSG ATSDIQQVSK IARAMVTQFG FAEELGHVDY ANEQQSYLGS YGGGTNHSQE
TQKIIDQKVK EIIDEGYNTA KRILTEKKDE WERLAQGLLE YETLTGAEIQ KVINGEPLNR
GDDEDDTPTS GTPSVTAIPK AKSRSKPRDG GMEPEPST
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