| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1055 |
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| Symbol | |
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| ID | 5711023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1088608 |
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| End bp | 1089708 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641266966 |
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| Product | ABC transporter related |
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| Protein accession | YP_001532398 |
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| Protein GI | 159043604 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCAGA CCACACCACC CGCCGTCGAG GTCAAGGGCC TGTCCAAGCA TTACGGCCCC
GTCAAGGCCC TGCGCCAGGT CGACCTGACC ATCGCCGCGG GGGAGTATTT TGTCCTGCTC
GGCCCCTCTG GCGGGGGCAA GACCACCCTC CTGCGCACCA TCGGCGGTTT TCACCGCCCC
ACCGAGGGGC AGGTCCTGCT CCATGGTCGC GACATGAGCC ACCTGCCGCC CGACAAGCGC
CCCACCACCA TGGTCTTCCA GGCCTACGCC CTCTTCCCGC ATATGACCGT GCTGCAAAAC
GTGTCCTACG GGCTGAAAGT GGCGGGGATG GACAAGGCCA CCGCCCAGGA AAAAGCCGCC
GCCATGATGG ATGTCGTGGG CCTTGCGGGC TTTGCCGAGC GCAAGCCGCA CGAGCTGTCC
GGTGGCCAGC AGCAGCGGGT GCAGCTGGCC CGCGCGCTGG TGCTCGACCG CGATATCCTG
CTCTTGGACG AGCCGCTCGC AGCCCTCGAC GCGCAGCTGC GCAAGGATAT GTGCCTGGAG
CTGAAACACC TGCAGGAAAA GGTCGGCATC ACCTTCATCC ACGTCACCCA CAACCAGGAA
GAGGCGATGA CCGTCGCCGA CCGCATAGCA CTCGTGGCCG ATGGCCAACT GGTCGAACAG
GGGGCCGCGC GCGACATCTA CCGCGCCCCC ATCAAGAAAT TCACCGCTGG CTTCGTGGGC
GAGAACAACC TGCTCTCCGG CACCGTGTCG CAGGTCAACG GCGTCTCCTG CATGGTCGAG
GTGGCGGGCG CGCAGCTTTC CGTGCCCAAG CGCGGGCAGG AGGTGACCCA GGGCCAGGCG
GTGGATCTCT CGATCCGCTC CGAACTGGTG CAACTGTCCA GGGTGGATGC CTCCAACGAT
CCGGGCGACG GCCATTCCAT CCTCGGCAGC TATGACGAGG CGGTCTATCT TGGCCTGACC
ACCTCGCATC TGGTGCGCCT GCCCAACGGG GTGGAGATGA CGTCGCGCAC GATCTCCGAC
GCGCTGGGCG ATCTGCCCAC CCCGGGTGAC CCGGTGCGCC TGTCCTGGCA GCCCGACGCC
ATCCGCCTGC ACACGAGCTG A
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| Protein sequence | MRQTTPPAVE VKGLSKHYGP VKALRQVDLT IAAGEYFVLL GPSGGGKTTL LRTIGGFHRP
TEGQVLLHGR DMSHLPPDKR PTTMVFQAYA LFPHMTVLQN VSYGLKVAGM DKATAQEKAA
AMMDVVGLAG FAERKPHELS GGQQQRVQLA RALVLDRDIL LLDEPLAALD AQLRKDMCLE
LKHLQEKVGI TFIHVTHNQE EAMTVADRIA LVADGQLVEQ GAARDIYRAP IKKFTAGFVG
ENNLLSGTVS QVNGVSCMVE VAGAQLSVPK RGQEVTQGQA VDLSIRSELV QLSRVDASND
PGDGHSILGS YDEAVYLGLT TSHLVRLPNG VEMTSRTISD ALGDLPTPGD PVRLSWQPDA
IRLHTS
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