Gene Dshi_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1016 
Symbol 
ID5710532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1049966 
End bp1050979 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content66% 
IMG OID641266927 
ProductPhoH family protein 
Protein accessionYP_001532359 
Protein GI159043565 
COG category[T] Signal transduction mechanisms 
COG ID[COG1702] Phosphate starvation-inducible protein PhoH, predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0442383 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCCTGA GCGCGACGAC CCCGCCTGCC ACCCAGCCGC CCACCCCGGA GCGTCTGATA 
GAATTTCCCG ACAACCGTGT CCTGATCGAC CTGTGCGGCG AATACGACCG CAACCTCGCC
CAGATCGAAC ACCAGCTTGG CGTGCAGATC CTGCGCCGCG GCAACCAGCT TGCGGTGTTC
GGCGATGCCG ACGCCCAGGT GCAGGCCGAG GGCGTGCTTC ATGCGCTGTA CCAGCGGGTG
GAATCGGGCA AATCCTCCGA GCCCGGCGAT ATCGACGGGC TGATCCGGCT CGGCGTGCCC
GAGGATGACG CCACCCCCGA GGCCGGCGAC CAGATGGAGC TGTTCAAGGG CGGCACGGTA
GAGCTCAAGA CCCGCAAGAA ATCGGTCGAG CCGCGCACCG AGATGCAGAA GGCCTATGTC
CAGAGCCTCT TTGCCAACGA GCTGGCCTTC GGGATCGGCC CGGCGGGCAC CGGCAAGACC
TATCTCGCCG TGGCCGTGGG CGTGACCATG TTTCTCGGCG GCCATGTGGA CAAGATCATC
CTCAGCCGCC CCGCGGTGGA GGCGGGCGAA CGGCTCGGCT TTCTGCCCGG CGACATGAAG
GACAAGGTCG ACCCCTACAT GCAGCCGCTC TACGATGCGC TCAACGATTT CCTGCCGGGC
AAGCAGGTCG CCAAGCTGAT CGAGGAAAAG CGGATCGAGA TCGCGCCGCT GGCCTTCATG
CGCGGCCGGA CCCTGTCGAA TGCCTTCGTG GTGCTGGACG AGGCCCAGAA CGCCACCACC
ATGCAGATGA AGATGTTCCT CACCCGGCTC GGCCAGGGCT CGCGCATGGT GATCACCGGC
GACCGGTCCC AGGTGGACCT GCCCCGCGGC GTGACCAGCG GTCTGCGCGA TGCCGAACGC
ATCCTGCGCG ACGTCAAGGG CGTGAGCTTC ACCTATTTCA CCGCCAAGGA CGTGGTGCGC
CATCCGCTGG TGGCCCGGAT CATCGAAGCC TATGACGCCG ACGATCCGAC CTGA
 
Protein sequence
MALSATTPPA TQPPTPERLI EFPDNRVLID LCGEYDRNLA QIEHQLGVQI LRRGNQLAVF 
GDADAQVQAE GVLHALYQRV ESGKSSEPGD IDGLIRLGVP EDDATPEAGD QMELFKGGTV
ELKTRKKSVE PRTEMQKAYV QSLFANELAF GIGPAGTGKT YLAVAVGVTM FLGGHVDKII
LSRPAVEAGE RLGFLPGDMK DKVDPYMQPL YDALNDFLPG KQVAKLIEEK RIEIAPLAFM
RGRTLSNAFV VLDEAQNATT MQMKMFLTRL GQGSRMVITG DRSQVDLPRG VTSGLRDAER
ILRDVKGVSF TYFTAKDVVR HPLVARIIEA YDADDPT