Gene Dshi_1011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1011 
Symbol 
ID5710527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1045050 
End bp1045466 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content69% 
IMG OID641266922 
Productferric uptake regulator 
Protein accessionYP_001532354 
Protein GI159043560 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGC AAGGTTTGGA ACGAGGGACG GAGTGGCTGG CGACGGGCGG GGTGCGTCCG 
ACGAAGCAAC GCGTGACCCT GGCCGCGTTG CTGGTGGGCG ACGGGCGGGA CCGGCACGTC
ACCGCCGAGA GCCTCTACGC CGCCGCGCTG GCGGGGGGGG AGCGGGTGTC GCTGGCGACG
GTCTACAACA CGCTGCGGGC GTTCTGCGAC GCCGGGCTGG TGCAGGAGAT CACGGTCGAC
GGCTCCAAGA GCTATTTCGA CACGCGGATC GACGACCACC CGCATTTCTA CTGGGAAGAG
GACAATACCC TCACCGACGC CCCGGCCGAG GAGCTGGAGA TCTCGCGCCT GCCGGCGATC
CCGGAGGGCA CGGAGATCTC GAAGGTCGAT GTGGTGATCC GGCTGCGCAA GGCCTGA
 
Protein sequence
MRAQGLERGT EWLATGGVRP TKQRVTLAAL LVGDGRDRHV TAESLYAAAL AGGERVSLAT 
VYNTLRAFCD AGLVQEITVD GSKSYFDTRI DDHPHFYWEE DNTLTDAPAE ELEISRLPAI
PEGTEISKVD VVIRLRKA