Gene Dshi_1010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1010 
SymbolfabA 
ID5710526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1044358 
End bp1044867 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content65% 
IMG OID641266921 
Product3-hydroxydecanoyl-(acyl carrier protein) dehydratase 
Protein accessionYP_001532353 
Protein GI159043559 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGT TTCCGACGCA GTTCGACAAG GACGACCTTC TGAAATGCGC ACGCGGAGAG 
CTGTTCGGCC CGGGCAATGC CCAACTGCCC GCGCCCCCCA TGCTGATGAT GGACCGCATC
ACCGAGGTCA GCGGCGACGC GGGTGCCCAT GGCAAGGGCC ATATCGTGGC CGAGTTCGAC
ATCACGCCGG AGCTGTGGTT CTTCGACTGC CACTTCCCCG GCAACCCGAT CATGCCCGGC
TGTCTCGGCC TCGACGGTCT GTGGCAGCTG ACGGGCTTCA ACCTGGGCTG GCGCGGCTGG
CAGGGGCGCG GCTACGCGCT CGGCGTGGGC GAGGTCAAGC TGACCGGCAT GGTCCGCCCC
GACCGCAAGA TGCTGCGCTA TTTCGTGGAC TTCACCAAGG CCGTGCAGAC CCGGCGCCTG
ACCATGGGCG TGGCCGACGG GCGTGTCGAG GCCGATGGCG AGGTCATCTA CCAGGTCAAG
GACATGAAAG TCGCTCTTTC CGAAAACTGA
 
Protein sequence
MAQFPTQFDK DDLLKCARGE LFGPGNAQLP APPMLMMDRI TEVSGDAGAH GKGHIVAEFD 
ITPELWFFDC HFPGNPIMPG CLGLDGLWQL TGFNLGWRGW QGRGYALGVG EVKLTGMVRP
DRKMLRYFVD FTKAVQTRRL TMGVADGRVE ADGEVIYQVK DMKVALSEN