Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1010 |
Symbol | fabA |
ID | 5710526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1044358 |
End bp | 1044867 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641266921 |
Product | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase |
Protein accession | YP_001532353 |
Protein GI | 159043559 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
TIGRFAM ID | [TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAGT TTCCGACGCA GTTCGACAAG GACGACCTTC TGAAATGCGC ACGCGGAGAG CTGTTCGGCC CGGGCAATGC CCAACTGCCC GCGCCCCCCA TGCTGATGAT GGACCGCATC ACCGAGGTCA GCGGCGACGC GGGTGCCCAT GGCAAGGGCC ATATCGTGGC CGAGTTCGAC ATCACGCCGG AGCTGTGGTT CTTCGACTGC CACTTCCCCG GCAACCCGAT CATGCCCGGC TGTCTCGGCC TCGACGGTCT GTGGCAGCTG ACGGGCTTCA ACCTGGGCTG GCGCGGCTGG CAGGGGCGCG GCTACGCGCT CGGCGTGGGC GAGGTCAAGC TGACCGGCAT GGTCCGCCCC GACCGCAAGA TGCTGCGCTA TTTCGTGGAC TTCACCAAGG CCGTGCAGAC CCGGCGCCTG ACCATGGGCG TGGCCGACGG GCGTGTCGAG GCCGATGGCG AGGTCATCTA CCAGGTCAAG GACATGAAAG TCGCTCTTTC CGAAAACTGA
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Protein sequence | MAQFPTQFDK DDLLKCARGE LFGPGNAQLP APPMLMMDRI TEVSGDAGAH GKGHIVAEFD ITPELWFFDC HFPGNPIMPG CLGLDGLWQL TGFNLGWRGW QGRGYALGVG EVKLTGMVRP DRKMLRYFVD FTKAVQTRRL TMGVADGRVE ADGEVIYQVK DMKVALSEN
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