Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1009 |
Symbol | fabB |
ID | 5710525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1043106 |
End bp | 1044335 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641266920 |
Product | beta-ketoacyl synthase |
Protein accession | YP_001532352 |
Protein GI | 159043558 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCGCG TCGTCATCAC CGGGATGGGC ATCGTCTCCC CGATCGGCAA TACCGTGTCC GAGGTCGAGG CCAGCCTGCG CGCGGGCCGC TCGGGCATCA CCTTCGCCGA AACCTATGCC GAGAACGGCT TCCGCAGCCA GGTCCACGGC GTGCCGGACA TCGTGCTCGA AGACCATATC GACAAGCGCA ACCTGCGCTT CATGGGCCCC GGCGCCGCGT TCAACTTCAT CGCCATGCAA CAGGCCATCG CCGATAGCGG GCTGGAGGAC AGCAATGTCT CCAACGAACG CTCCGGGCTG ATCATGGGCT CGGGCGGGCC GTCCACCTCG AACTTCTTCC AGGCGTTCAA GACGGTCAAG GAAAAGGGCG CGCCCAAGCG GATGGGGCCG TTCATGGTCA CGCGCTGCAT GTCGTCCACC AACTCCGCCT GCCTCGCGAC ACCGTTCAAG ATTAAGGGCG TGAACTACTC GATCACCTCG GCCTGCTCCA CCTCCGCCCA TTGCATCGGC AACGGGGTGG AACTGATCCA GATGGGCAAG CAGGACATCG TGTTCGCCGG CGGCGGCGAG GAGATCGACT GGACCCTGTC GTGCCTCTTC GACGCCATGG GCGCGATGAG CTCGAAATAC AACGACACCC CCACCACCGC CTCGCGCACC TTCGATGCGA CCCGCGACGG CTTCGTGATC GCCGGCGGCG GCGGGGTGCT GGTGCTGGAG GAACTCGAAC ACGCCAAGGC GCGCGGCGCG AAAATCTACG CCGAGGTCAC CGGCTACGGC GCGACCTCGG ACGGCTACGA CATGGTCGCG CCCTCGGGCG AAGGCGGCGA GCGGTCGATG CGCCAGGCCA TCGCCACCCT GCCCGAAGGC CGCAGCGTCG ACTACATCAA CGCCCATGGC ACCTCGACCC CCGTGGGCGA CGTGACCGAG ATCGAGGCCG TGCGCCGCGT CTTCGGCGAA GGCACCACCC CGCCCGTCGC CTCCACCAAG TCCCTGACCG GACACTCGCT GGGCGCGACC GGCGTGCACG AGGCGATCTA TTCGCTGATC ATGATGAACA AGGGCTTCAT CGCGGCCTCG GCCAACATCA CCGAGCTCGA CCCGGCGATC CACCCTGAGG AAATCGTGAC AGAACTGCGC GAGGGTGTCA CACTCGATTC CGTGCTCTCC AACAGCTTCG GCTTCGGCGG CACCAATGCG ACGCTGCTGA TGTCGCGCTA CCTGGACTGA
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Protein sequence | MRRVVITGMG IVSPIGNTVS EVEASLRAGR SGITFAETYA ENGFRSQVHG VPDIVLEDHI DKRNLRFMGP GAAFNFIAMQ QAIADSGLED SNVSNERSGL IMGSGGPSTS NFFQAFKTVK EKGAPKRMGP FMVTRCMSST NSACLATPFK IKGVNYSITS ACSTSAHCIG NGVELIQMGK QDIVFAGGGE EIDWTLSCLF DAMGAMSSKY NDTPTTASRT FDATRDGFVI AGGGGVLVLE ELEHAKARGA KIYAEVTGYG ATSDGYDMVA PSGEGGERSM RQAIATLPEG RSVDYINAHG TSTPVGDVTE IEAVRRVFGE GTTPPVASTK SLTGHSLGAT GVHEAIYSLI MMNKGFIAAS ANITELDPAI HPEEIVTELR EGVTLDSVLS NSFGFGGTNA TLLMSRYLD
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