| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0952 |
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| Symbol | trpA |
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| ID | 5710643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 976376 |
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| End bp | 977194 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641266863 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001532298 |
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| Protein GI | 159043504 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTACA GGGACGCAGG GCTGACCATG ACACGGATCG ACGAGACATT CGCGCGGCTG
CGGGCAGAAG GCAAGAAAGC CTTCGTGGCC TATGTGATGG GCGGCGATCC GGATTACGAC
ACCTCGCTGG AGATCGTGCG CGGCCTGCCC GCGGCAGGCG TCGACATCAT CGAGCTTGGC
ATGCCCTTCA CCGACCCCAT GGCCGACGGC CCCACGATCC AGCTTGCGGG CCAGCGCGCG
CTGGAGGCGG GCCAGACCCT CGACAAGACC CTCGATCTCG CCCGCGCCCT GCGCGAGACC
GACGATGCGA CACCGATCGT GATGATGGGC TACTACAACC CGATCTATTC CCGCGGGGTG
GACCGTTTTC TCGCGGATGC CAAAGACGCC GGGATCGACG GGCTGATCGT CGTGGACCTG
CCCCCCGAGG AAGACAGCGA GCTTTGCATC CCCGCCCAGG CCGCGGGTCT GAACTTCATC
CGGCTGGCCA CACCCACAAC CGACGACGCG CGCCTGCCCA AGGTGCTGCA GAACACGTCC
GGCTTCGTCT ACTACGTGTC GATCACCGGG ATCACCGGCG CGGCGCAAGC GCAGGCCAGC
GATGTGGCCC CGGAAGTGGC CCGGATCAAA TCCGCCACCG ACCTGCCGGT GATCGTGGGC
TTCGGCGTCA AGACCCCCGA GCTGGCCGAG AGCATCGCGG GCGTGGCTGA CGGCACCGTG
GTGGGCTCCG CCATCGTCAA GATGGTCGAG GACGGCAAGC CCGTGCCGGA GATCCTGGGC
TTCGTGGCCG ATCTCGCCGC GGGCGCGCAC CGGGCCTGA
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| Protein sequence | MGYRDAGLTM TRIDETFARL RAEGKKAFVA YVMGGDPDYD TSLEIVRGLP AAGVDIIELG
MPFTDPMADG PTIQLAGQRA LEAGQTLDKT LDLARALRET DDATPIVMMG YYNPIYSRGV
DRFLADAKDA GIDGLIVVDL PPEEDSELCI PAQAAGLNFI RLATPTTDDA RLPKVLQNTS
GFVYYVSITG ITGAAQAQAS DVAPEVARIK SATDLPVIVG FGVKTPELAE SIAGVADGTV
VGSAIVKMVE DGKPVPEILG FVADLAAGAH RA
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