| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0932 |
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| Symbol | |
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| ID | 5710623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 956341 |
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| End bp | 959109 |
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| Gene Length | 2769 bp |
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| Protein Length | 922 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641266843 |
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| Product | ATPase |
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| Protein accession | YP_001532278 |
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| Protein GI | 159043484 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGATCC ACCGCGCAGG TATTTCCGCG ATCGCGTCCG AGATCGCCAC AGAGCGCGAT
CCGGCCAAAA CGCAGTGGCA TGAACGCAGC GTCGAGGAGG TGTTGAGCCT CGTCGACGGT
GAGACATCCG GGCTTTCGTC CGCGGTTGCG GCGGAACGGC TGCGAACCGA CGGGCCGAAC
CGCCTTCCTG AGCCACCGCG GGCGGGTCCG CTTGCGCGCT TTCTGCGCCA GTTTCACAAC
CTTCTGATCT ACGTTCTGCT TGCGGCGGCG ACTGTGACCG CAACGCTTGG GCATCTGGTA
GACACCGGGG TTATCCTCGC GGTTGTGTGC GTCAATGCGA TCATCGGCTT CGTGCAGGAA
GGCAAGGCCG AGCAGGCGCT GTCGGCCATA AAAAACATGC TGGCCCCCGA GGCGCGCGTG
CTCCGGGACG GTCGTCGCGT GCTGGTGCCG GCGGAGGAGC TGGTGCGTGG CGACATCGTG
GCGCTCGAGC CGGGGGACCG GGTGCCTGCG GACCTGCGGG TCATCGCGTC CTATGGGCTG
CGCATTCAGG AAGCAGTGCT GACCGGCGAG TCCGTCCCGG TCGACAAGTC GACAACGCCG
GTCGATCAGG ACGCGTCGCT GGGTGACCGC CGGTCGATGG CGTTCAGCGG CGCGCTTGTC
GCGGCCGGTG CCGGCCGAGG CATTGTTGTC GCAACCGGAA CCGAAACCGA GATCGGCCGC
ATCAGCGGGA TGCTGGAAAC GGTCGAGACG ACGACCACGC CGCTCCTGCG GCAGATGGAG
GGCTTCGCGC GCACCATCAC GCTGGCCATT CTTGCCATCG CGACCCTTAT CCTCATGTTC
GGATACTTCG GCAGCGGGAT GTCTTTCAGG GACATCTTCA TGGCGGTCGT GGGCCTATCG
GTAGCGGCCA TTCCGGAGGG TCTGCCGGCC ATCCTGACCG TGACGCTGGC GATCGGCGTG
CAGGGCATGG CGGCGCGGCG GGCCATCGTA CGCCGCCTGC CGGCGATCGA GGCGCTGGGG
TCGGTATCGG TGATCTGCTC GGACAAGACG GGCACACTCA CAAGGAACGA GATAACGGTG
GCGTCAGTCG CGACAGCGCG GCGTCTGTTT CACGTGACCG GCGCGGGTTA CGGGCCATGT
GGCAACGTCG CGCTGGAGGG GCGCGACATC GACGTTTCGG TCTATCCGCT GCTGGGTGCC
CTCGCGCGCG GAGCCATCTT GTGCAACGAC GCCGATATCG CCGAGATCCG CGGGACCTGG
TCGGTTACCG GCGACCCGAT GGAGGGCGCG CTGGTCTCGT TCGGGTGGAA GGCCGGGCAT
GAGCCGGACG CCCTGCGGCT GGCCAATCCT CGGGCCGACG CCATCCCCTT CGATGCCGCG
CACCGTTTCA TGGCCACGCT GCACCTTGAC CGCGAGGGGG GCGCCGCAAT CCATGTGAAG
GGGGCGCCCG AGCGTGTGAT CGCCATGTGC GCGTCGCAGT ACGGCGAGGG GAACAACCGC
GAGCCGCTTG ACCCTGAATA CTGGGTCAGG CGCGCGGAAG AGATTGCCGC CAGCGGGCAG
CGCGTGCTTG CCATCGCTAC ACGTAAGGCA GATCCGGCGC AGCGGACGCT GAGCTTTGGC
GAGGTCGACG GCGACCTTAC GCTGCTCGGC CTTCTGGGAC TGATCGACCC GCCGCGCGAA
GAGGCCGTCG CCGCGGTGGC GGAGTGCCAT GCGGCCGGCA TCCGAGTGAA GATGATCACC
GGTGATCATG CAGGGACCGC ATCCGCCATC GCCCGGTCGC TGGGGCTGGA AAATGCGGGC
GAGGTGCTGA CGGGCGCGGA GATCGACAGG CTTGGCGATG ATGACCTGAG GCGCGCGGCG
GCGCGGATCA ACGTGTTCGC CCGCACCAGC CCGGAGCACA AGCTGCGCCT GGTGGAGGCA
TTGCAGGCCG GCGGTGCGGC GGTGGCGATG ACCGGCGATG GCGTGAACGA CGCACCGGCG
CTCAAGCGTG CGGATATCGG CGTAGCCATG GGCCGGACGG GAACGGCGGC GGCCAAGGAA
GCCGCCGAGA TTGTTCTCGC AGACGACAAT TTCGCGACCA TCGCGGAGGC CGTACGCGCA
GGGCGCACGG TCTATGACAA CCTGAAGAAG GCAATCGTGT TCCTGTTGCC GGTGAACGGG
GGCGAGGCGC TTGCGCTGAT CCTGGCGCTG CTGCTTGGCC TCACGCTGCC TATCACACCG
GTGCAGGTCT TGTGGGTCAA CATGGTGAGT TCCGTGGTGC TGGCGATGGC GTTGGCCTTC
GAGGGTCCGG AGCCCGACAT CATGCGCCGC CCCCCGCGGC GCGCGGACGA ACCGATCCTG
TCGCGCTTCG TGCTCTGGCG GGTCGGGTTC GTCTCGGTAC TGTTCTCGTC GGGCATCTTC
GGGATGTTCA CGCTCGCGCA GGCCCAAGGG GCGAGCCTGG AAGAGGCGCG CACCATGGCG
GTCAACACGC TGGTGTTTAT GGAGATCTTC TACCTCTTCT CGGTGCGGTT CCTCAACACG
ACATCGCTGT CGCTGCGCGC CATCCTCGGC ACGCGGCCCG TGATATTCGC GATAGCGGCG
GTCACGCTGC TGCAACTCGC CTTCACTTAC GCGCCGTTCA TGGAGGCCTT CTTTGACACG
CGACCTCTGA GCTTGGTGCA GGGCCTTACC ATCGTCGCAA TCGGACCTCT GCTGCTCCTG
GTCCTTGAAA TCGAGAAACG CGTTTTGCGC GGATCGCGCC CGGCTGTCCC ACGATCCCTG
AACCCCTGA
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| Protein sequence | MTIHRAGISA IASEIATERD PAKTQWHERS VEEVLSLVDG ETSGLSSAVA AERLRTDGPN
RLPEPPRAGP LARFLRQFHN LLIYVLLAAA TVTATLGHLV DTGVILAVVC VNAIIGFVQE
GKAEQALSAI KNMLAPEARV LRDGRRVLVP AEELVRGDIV ALEPGDRVPA DLRVIASYGL
RIQEAVLTGE SVPVDKSTTP VDQDASLGDR RSMAFSGALV AAGAGRGIVV ATGTETEIGR
ISGMLETVET TTTPLLRQME GFARTITLAI LAIATLILMF GYFGSGMSFR DIFMAVVGLS
VAAIPEGLPA ILTVTLAIGV QGMAARRAIV RRLPAIEALG SVSVICSDKT GTLTRNEITV
ASVATARRLF HVTGAGYGPC GNVALEGRDI DVSVYPLLGA LARGAILCND ADIAEIRGTW
SVTGDPMEGA LVSFGWKAGH EPDALRLANP RADAIPFDAA HRFMATLHLD REGGAAIHVK
GAPERVIAMC ASQYGEGNNR EPLDPEYWVR RAEEIAASGQ RVLAIATRKA DPAQRTLSFG
EVDGDLTLLG LLGLIDPPRE EAVAAVAECH AAGIRVKMIT GDHAGTASAI ARSLGLENAG
EVLTGAEIDR LGDDDLRRAA ARINVFARTS PEHKLRLVEA LQAGGAAVAM TGDGVNDAPA
LKRADIGVAM GRTGTAAAKE AAEIVLADDN FATIAEAVRA GRTVYDNLKK AIVFLLPVNG
GEALALILAL LLGLTLPITP VQVLWVNMVS SVVLAMALAF EGPEPDIMRR PPRRADEPIL
SRFVLWRVGF VSVLFSSGIF GMFTLAQAQG ASLEEARTMA VNTLVFMEIF YLFSVRFLNT
TSLSLRAILG TRPVIFAIAA VTLLQLAFTY APFMEAFFDT RPLSLVQGLT IVAIGPLLLL
VLEIEKRVLR GSRPAVPRSL NP
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