| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0915 |
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| Symbol | thiD |
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| ID | 5710605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 936787 |
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| End bp | 937584 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641266825 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_001532261 |
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| Protein GI | 159043467 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.257449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGACCG CATTGACGAT TGCAGGCTCG GATTCCGGCG GCGGCGCCGG GATACAGGCC
GACCTCAAGG CGTTTTCCGC GCGCGGGGTC TACGCAACCA GCGTGATCAC CGCGCTCACC
GCCCAGAACA CCCGCGCCGT CACGATGGTC GAGGGCGTCT CCCTCCCGAT GATCCGCGCC
CAGATGGCGG CCGTGTTCGA GGACATCGCC GTGGACGCGG TCAAGATTGG GATGCTGGGC
ACGCCCGAGG TGATCGCCGC CGTGGCCGAG GGTCTGGCGG GGTTCAAGGG CCCCGTCGTG
CTCGACCCGG TGATGGTGGC GAAATCCGGC GACGCGCTGC TGGCGGCGGA GGCCGAAGAA
GCGCTGGCGA CCCATCTGCT GCCCCGCGCG ACCCTGCTGA CCCCCAACCT GCCCGAGGCC
GCGCGCCTGC TGGGCGGGGA CGAGGATGAC GACCCCGCCG CCATGGCCGC CGCCGGCCAG
GCCCTGCGCA CCATGGGCGC GGGCGCAGTG CTGATGAAGG GCGGCCACGG GCGCGGCGCC
ACATGCGTTG ACCTGCTGGT GGATGGCGAG GATGCGCCCC TGCGGCTCGA GGCCTCGCGC
ATCGCCACCC GCAACACCCA CGGCACCGGC TGCACCCTCT CGGCCGCCAT CGCCGCCGAA
CTGGCCAAGG GCGCGGACCT GCGCGGCGCG ATCACCGCTG CCCATGGCTA CCTGCAAGGG
GCCATCGCCG CCGCCGACCG GCTCGATATC GGGACGGGCC ACGGCCCGGT TCACCATTTT
CACGAGGTCT GGCCATGA
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| Protein sequence | MATALTIAGS DSGGGAGIQA DLKAFSARGV YATSVITALT AQNTRAVTMV EGVSLPMIRA
QMAAVFEDIA VDAVKIGMLG TPEVIAAVAE GLAGFKGPVV LDPVMVAKSG DALLAAEAEE
ALATHLLPRA TLLTPNLPEA ARLLGGDEDD DPAAMAAAGQ ALRTMGAGAV LMKGGHGRGA
TCVDLLVDGE DAPLRLEASR IATRNTHGTG CTLSAAIAAE LAKGADLRGA ITAAHGYLQG
AIAAADRLDI GTGHGPVHHF HEVWP
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