| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0847 |
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| Symbol | pyrD2 |
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| ID | 5711473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 856488 |
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| End bp | 857546 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641266756 |
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| Product | dihydroorotate dehydrogenase 2 |
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| Protein accession | YP_001532193 |
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| Protein GI | 159043399 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0167] Dihydroorotate dehydrogenase |
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| TIGRFAM ID | [TIGR01036] dihydroorotate dehydrogenase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.211753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.196757 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC TCGAACGCCT CGGCCTCGCG GCCTTGCAGC GAGTCGATCC CGAAACCGCC
CATGGCCTGG CGCTGCGCGC GCTGAACGCA GGGCTCGGGC CCCGTTCCGG CCCGGTCACG
AGCCCGCGGC TCAGCACCCA ACTGGCCGGG CTGCGCCTGC CCAACCCCGT GGGGCTCGCC
GCCGGGTTCG ACAAGAATGC CGAAACGCTC GGGGCGCTGG CGCAGACCGG CTTCGGGTTT
CTCGAGGTCG GCGCCGCCAC GCCCCTGCCC CAGCCCGGCA ACCCGCGTCC GCGCCTGTTT
CGCCTCTCCG AGGACCGCGC CGCGATCAAC CGGTTCGGCT TCAACAATGA CGGGGCCGAG
GCGATCGCCG CGCGGCTGGC CAGGCGTCCC GAAGGTCGGG TGGTCGGCCT GAACCTCGGC
GCCAACAAGA CCAGCGCGGA CCGGGCCGGG GATTTCGCCC GGGTGCTCGC CACCTGCGGC
GCCCATGTGG ATTTCGCGAC GGTCAACGTT TCGTCGCCCA ACACCGAAAA GCTGCGCGAC
CTGCAAGGCG CCGCCGCCCT GCGCGCGCTG CTGGAGGGGG TGATGGCCGC CCGTGCCGCC
CTCGTCCGCC CGATCCCGGT GTTCCTCAAG ATCGCCCCGG ACATGGACGA CGCCGCCCTG
GACGACATCG CCGGCGTAGT GACGGAGGCG GGCCTGCACG GCATCATCGC CACCAACACA
ACGCTGGCGC GCGACGGGCT CGTCTCGGCC CACAAGGGCG AGGCCGGAGG CCTGTCCGGC
GCACCGCTCT TCGAGGCGTC GACGCGGGTG CTGGCGCGAC TGTCGCAGGC CACCGAAGGC
ACTGTCCCGC TGATCGGCGT CGGCGGCGTG GACAGTGCGG GGGCGGCGTA TGCCAAGATC
CGCGCAGGCG CGTCGGCCGT TCAGCTCTAC ACCGCGCTGG TCTATGGCGG GATCAGCCTC
GCGGCCGAGA TCGCCACGGG GCTGGACACT CTGCTGGAAC GGGACGGGTT TTCCACCGTG
GCAGACGCGG TCGGCACGGG ACGAGGAGAC TGGCTATGA
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| Protein sequence | MSTLERLGLA ALQRVDPETA HGLALRALNA GLGPRSGPVT SPRLSTQLAG LRLPNPVGLA
AGFDKNAETL GALAQTGFGF LEVGAATPLP QPGNPRPRLF RLSEDRAAIN RFGFNNDGAE
AIAARLARRP EGRVVGLNLG ANKTSADRAG DFARVLATCG AHVDFATVNV SSPNTEKLRD
LQGAAALRAL LEGVMAARAA LVRPIPVFLK IAPDMDDAAL DDIAGVVTEA GLHGIIATNT
TLARDGLVSA HKGEAGGLSG APLFEASTRV LARLSQATEG TVPLIGVGGV DSAGAAYAKI
RAGASAVQLY TALVYGGISL AAEIATGLDT LLERDGFSTV ADAVGTGRGD WL
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