| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0839 |
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| Symbol | |
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| ID | 5711465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 849631 |
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| End bp | 851409 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641266748 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_001532185 |
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| Protein GI | 159043391 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.704355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACCT ATACCGCCCC CACGAAGGAC ATGCAGTTCC TGCTGCACGA CGTGCTCCAG
GTCTCGCAAA ACGACATCCC CGGCTATGAC GAGCTGGACC GCGACTTCAC CGGCGCCGTG
CTCGACGAGG CCGGCAAGCT CGCGATGGAG GTTCTGCACC CCCTGAACAC CGTCGGCGAT
CAGCAAGGCT GCGTTCTGGA AAACGGCGTG GTGCGCACGC CGGAGGGGTT CAAGGACGCC
TACAAGATCA TGTGCGACGG CGGCTGGACC GGGCTGGACA TGGATCCCGA ATACGGCGGC
CAGGGCATGC CCTACATCCT GCAGACCGCA ACGGGCGAGA TGTTCTCGGC CGCCAACATG
GCGTTCCAGA TGTATAACGG GCTGACCCAT GGCGCGATGT CGGCCCTGGC CGAGCACGGC
TCGGACCAAC AGAAGGCGAC CTACCTGCCC AAGATGATCG CGGGCAACTG GACCGGCACG
ATGAACCTGA CCGAGCCGCA ATGCGGCACC GATCTGGGCC TGATCCGCAC CAAGGCAGAG
CCGCAGGAGG ATGGCAGCTA CGCCATTACC GGCCAGAAGA TCTGGATCTC GGCGGGCGAG
CACGACATGT CCGAGAACAT CATCCACCTG GTGCTGGCCA AGATCCCCGG CGGCCCCGAG
GGCGTGAAGG GCATCTCGCT CTTCATCGTG CCGAAGTTCC TGGTGAACGA CGATGGCAGC
CTGGGCGCGC GCAACGCCGT CTCCTGCGGC GGGCTGGAGC ACAAGATGGG CATCCACGGC
AACGCCACCT GCGTGATGAA CTATGATGGC GCAACCGGCT TCCTCGTGGG CGAGATGCAC
AAGGGGCTGC GCGCCATGTT CACCATGATG AACGAAGCCC GCCTCTCGGT GGCGCTGCAG
GGCTACGCCC AGGGCGACAT CGCCTACCAG AACGCGCTCG GCTTTGCCCG CGACCGGCTC
CAGGGCCGCG ACATCACCGG CGCACAGGCC CCCAACAAGC CCGCCGACCC GATCATCGTG
CACCCGGATG TGCGTCGCAA CCTGATGGAC CAGAAATCCT TCGTCGAAGG CGCCCGGGCA
CTGGTGTTCT GGGGGGCCAC GCTGATCGAC CAGGCGCATC GCTGCAAGGA CGCCGAGGCG
GACGCGATGA TTTCGCTCCT GATCCCGGTG ATGAAGGGCT TCCTGACCGA CAAGGGATTC
GAGACCACAG TGCTGGCCCA GCAGACCCTC GGCGGGTCGG GCTTCACCCG CGAATGGGGG
CTGGAGCAGT TCGTCCGCGA CGCCCGCATC GCGATGATCT ACGAAGGCAC CAACGGCATC
CAGTCCCTCG ACCTCGTCGG TCGCAAGCTG GGGCTGAATG GCGGCAAGAC CGTCATGGCC
TTCTTCGACA TGGTCAAGAC CTTCCTCAAG GAGAACGAAG ACAATGCCGA GCTGAAATCC
GGCTTCCTCG ACCCGCTGAA GGCGGCCTCC AAGGACCTGC AGGCGGCGGG GATGTACTTC
ATGTCCGACG GCATGAAGAA CCCCAACAAC GCTCTGTCGG GGTCCTATGA CTTCATGCAC
CTCTTCGGCC ATGTCTGCCT GGGGCTGATG TGGGCGCGGA TGGCCAAGGC GTCGATAGCC
GCCCTGGAGG CAGGCGATAC CGATACCGAC TTCCACGCGA CCAAGATCGC CACGGGCCGC
TACTACATGT CCCGCCAGCT GCCGATGACC GGCACGCACC TGGCGCGCAT CATGTCCGGC
GCCGAACCGG TCATGGCGCT GGACGCGGCC AACTTCTAA
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| Protein sequence | MPTYTAPTKD MQFLLHDVLQ VSQNDIPGYD ELDRDFTGAV LDEAGKLAME VLHPLNTVGD
QQGCVLENGV VRTPEGFKDA YKIMCDGGWT GLDMDPEYGG QGMPYILQTA TGEMFSAANM
AFQMYNGLTH GAMSALAEHG SDQQKATYLP KMIAGNWTGT MNLTEPQCGT DLGLIRTKAE
PQEDGSYAIT GQKIWISAGE HDMSENIIHL VLAKIPGGPE GVKGISLFIV PKFLVNDDGS
LGARNAVSCG GLEHKMGIHG NATCVMNYDG ATGFLVGEMH KGLRAMFTMM NEARLSVALQ
GYAQGDIAYQ NALGFARDRL QGRDITGAQA PNKPADPIIV HPDVRRNLMD QKSFVEGARA
LVFWGATLID QAHRCKDAEA DAMISLLIPV MKGFLTDKGF ETTVLAQQTL GGSGFTREWG
LEQFVRDARI AMIYEGTNGI QSLDLVGRKL GLNGGKTVMA FFDMVKTFLK ENEDNAELKS
GFLDPLKAAS KDLQAAGMYF MSDGMKNPNN ALSGSYDFMH LFGHVCLGLM WARMAKASIA
ALEAGDTDTD FHATKIATGR YYMSRQLPMT GTHLARIMSG AEPVMALDAA NF
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