| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0809 |
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| Symbol | lepA |
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| ID | 5711435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 817541 |
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| End bp | 819340 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641266718 |
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| Product | GTP-binding protein LepA |
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| Protein accession | YP_001532155 |
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| Protein GI | 159043361 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0481] Membrane GTPase LepA |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.400821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAGC TCTCGCGCAT CCGAAACTTC TCCATCGTGG CTCATATCGA CCACGGCAAG
TCCACCCTTG CGGATCGTCT CATCCAGGAG ACGAACACCG TCTCCGCGCG GGACATGAAG
GAGCAACTGC TCGACGCCAT GGATATCGAG CGCGAGCGCG GCATCACCAT CAAGGCCAAC
ACCGTGCGGA TCGACTACAC CGCCGATGAC GGGCAGGACT ACGTGCTCAA CCTGATCGAC
ACGCCGGGCC ATGTGGATTT CGCCTACGAG GTCTCCCGCT CCATGCGCGC GGTCGAGGGC
TCGCTGCTGG TCGTCGACAG CACGCAAGGT GTCGAGGCGC AGACGCTCGC CAATGTCTAC
CAGGCCATCG ACGCGGATCA CGAGATCGTG CCCGTGCTGA ACAAGATCGA CCTGCCCGCC
TCGGATTGCG ACCGGGTGGC CGAGCAGATC GAGGACGTGA TCGGCATCGA CGCCTCGGGC
GCCATCCGCG TCTCCGCCAA GACGGGGCAG GGGATCCACG AAACACTCGA GGCCATCGTC
CACCACCTGC CCGCCCCCAA GGGCACCCGC GACGCCCCCC TCAAGGCCAT GCTGGTGGAC
AGCTGGTACG ACGCCTATCT CGGCGTCATC GTCCTCGTCC GCATCATCGA CGGCACCCTC
AGGAAGGGCG AGCGGATCAA GATGATGTCC AACGGCACCG TCCACCATGT CGACCGCATC
GGCGTTTTCC GCCCCGCCAT GCAGCCCGTG GACGAGCTCG GCCCGGGCGA GATCGGCTTT
CTGACCGCCT CGATCAAGCA GGTCCGCGAC ACCCGCGTCG GCGACACCAT CACCCACGAG
AAGAAGGGCG CCGAAACCGC GCTCCCGGGC TTCAAGCCGT CCCAGCCGGT GGTGTTCTGC
GGCCTCTTCC CCGTGGACAG CGCCGAGTTC GAGGACCTGC GCGACGCGAT CGAGAAACTC
GCCCTCAACG ACGCCTCCTT CAGCTACGAG ATGGAAACCT CCGCCGCCCT CGGCTTCGGC
TTCCGCTGCG GCTTCCTCGG CCTGCTGCAC CTCGAAGTGA TCCGCGACCG GATAGAGCGG
GAATATGACA TCGAGCTCAT CACCACCGCG CCCTCGGTGA TCTACCACGT CTACATGCGC
GACGGCACCA TGCGGGAGCT GCACAACCCC GCCGATATGC CCGACCTGAC CCATGTGGAC
CACCTCGAAG AGCCGCGCAT CAAGGCCACC ATCCTCGTGC CCGACGACTA CCTCGGCGAC
GTGCTGAAAC TCTGCCAGGA CCGCCGCGGC ATCCAGATGG ATCTGACCTA TGCCGGCAGC
CGCGCCATGG TGGTCTACGA CCTGCCCCTG AACGAGGTTG TGTTCGACTT CTACGACCGG
CTGAAATCCG TCACCAAGGG CTATGCCAGC TTCGATTACC AGATGATCGG CTACCGCCAG
GACAACCTGG TGAAGATGCA GGTGCTGGTG AATGACGAGC CGGTGGACGC CCTCTCGACC
ATGGTCCACC GCGACCGGGC CGAGGCGCGC GGCCGGGCGA TGTGCGAGAA ACTCAAGGAC
CTGATCCCCC GCCACATGTT CAAGATCCCG ATCCAGGCGG CCATCGGCGG CAAGGTCATC
GCCCGCGAAA CCCTCTCGGC GCTCCGCAAG GACGTGACCG CGAAATGCTA CGGCGGAGAC
GCCACCCGCA AGCGCAAGCT TCTGGACAAG CAGAAGGCGG GCAAGAAAAA GATGCGCCAG
TTCGGGAAGG TGGATATCCC CCAAGAGGCT TTCATCAGTG CGTTGAAGAT GGACGGCTAA
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| Protein sequence | MTELSRIRNF SIVAHIDHGK STLADRLIQE TNTVSARDMK EQLLDAMDIE RERGITIKAN
TVRIDYTADD GQDYVLNLID TPGHVDFAYE VSRSMRAVEG SLLVVDSTQG VEAQTLANVY
QAIDADHEIV PVLNKIDLPA SDCDRVAEQI EDVIGIDASG AIRVSAKTGQ GIHETLEAIV
HHLPAPKGTR DAPLKAMLVD SWYDAYLGVI VLVRIIDGTL RKGERIKMMS NGTVHHVDRI
GVFRPAMQPV DELGPGEIGF LTASIKQVRD TRVGDTITHE KKGAETALPG FKPSQPVVFC
GLFPVDSAEF EDLRDAIEKL ALNDASFSYE METSAALGFG FRCGFLGLLH LEVIRDRIER
EYDIELITTA PSVIYHVYMR DGTMRELHNP ADMPDLTHVD HLEEPRIKAT ILVPDDYLGD
VLKLCQDRRG IQMDLTYAGS RAMVVYDLPL NEVVFDFYDR LKSVTKGYAS FDYQMIGYRQ
DNLVKMQVLV NDEPVDALST MVHRDRAEAR GRAMCEKLKD LIPRHMFKIP IQAAIGGKVI
ARETLSALRK DVTAKCYGGD ATRKRKLLDK QKAGKKKMRQ FGKVDIPQEA FISALKMDG
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