Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0780 |
Symbol | |
ID | 5711216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 785693 |
End bp | 786637 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641266689 |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_001532126 |
Protein GI | 159043332 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0399291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0368265 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGGACC CTGCCCCCTA TCGCGCGGAC CTCGCACGGG CCCCGCAGGA CGCGCGCGCC GTCTGGGTGC GCGCCGATGA CGGCGTGCGC TTGCGGGTGG CGCTCCATGC CACGGGCGAC AAGGGCACGG TCCTGATCTT CCCCGGTCGC ACCGAGTGGG TCGAGAAATA CGGGCGGGTC GCCGGGGATC TGGCGTCCGC GGGCTACAGC GCGCTGGTTA TCGACTGGCG CGGACAGGGT CTGTCGGACC GCCTGCTGGA TGATCCGCTC AAGGGCCATG TGGCCGATTT TCCGGACTAC CAGATGGATG TGCAGGCCGC GCTGGATTGC GCCCGGGATG CAGGGTTGCC GGAGCCCTAT TTCCTGATCG CGCATTCCAT GGGCGGCGCC ATCGGCCTGC GTGCGGTGAT GCAGGACCTG CCGGTGCGCG GCGCGGTGTT CTCCGGGCCG CTCTGGGGGG TGAAATTCCC GCTCTGGGCG CGGCCCGTGG CGGGGCTTCT GGGCACGCTG TCTTCGTGGT TCGGGCTCGG CGAGGGATAC GCGCCCAGCA CCAGCCCGGA GCCCTATATC CTGACCGCCC CCTTTCACGA CAACCTGCTG ACCACCGACC GGGCCGAGTA TCAGGACATG GCCGACCAGA TGCGGGCCGA GCCGGGCTTT GCCCTGGCCG GGCCGACGAT GATCTGGGTG CACGAGGCCA ATTGCGAATG CAAATGGCTC GCGACGCAGC CCTCCCCCGC CCTGCCCTGC CTGACCTTGC TGGGCACGAA CGAGCGGATC GTGGATGTGG GCGTGATCCA CGAGCGCATG GCGCGCTGGC CCGGCGGCGA GCTGGTCTTG GTCGAGGGCG GCGAACACGA GGTGCTGATG GAATCACCCG ACAAGCGCGA CCCGCTGATC GCGCGGATGA TCGCGTTCTT CGACGCGCAT CGCGGCACCG CGTAG
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Protein sequence | MTDPAPYRAD LARAPQDARA VWVRADDGVR LRVALHATGD KGTVLIFPGR TEWVEKYGRV AGDLASAGYS ALVIDWRGQG LSDRLLDDPL KGHVADFPDY QMDVQAALDC ARDAGLPEPY FLIAHSMGGA IGLRAVMQDL PVRGAVFSGP LWGVKFPLWA RPVAGLLGTL SSWFGLGEGY APSTSPEPYI LTAPFHDNLL TTDRAEYQDM ADQMRAEPGF ALAGPTMIWV HEANCECKWL ATQPSPALPC LTLLGTNERI VDVGVIHERM ARWPGGELVL VEGGEHEVLM ESPDKRDPLI ARMIAFFDAH RGTA
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