| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0777 |
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| Symbol | thrS |
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| ID | 5711212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 782164 |
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| End bp | 784128 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641266685 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_001532123 |
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| Protein GI | 159043329 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.795013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.073481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAGA TCTCTCTCAC CTTTCCCGAT GGCAATGCAC GCGATTTCGA CGCAGGGGTC
ACACCGGCGG AGGTCGCCGC CAGCATCTCC ACCTCCCTTG GCAAGAAGGC CATCTCCGCC
ACCGTGAACG GCGCGCATCA CGACCTGCAA TGGCCCATCG ACGCCGATGC CAGCATCGCG
ATCCACACGC TCAAGGACGA CGCCCAGGCG CTGGAGCTGA TCCGCCACGA CTGCGCCCAT
ATCATGGCCC GCGCCGTGCA GGAGATCTGG CCCGATGTGA AAGTCACCAT CGGCCCGGTG
ATCGAGAACG GCTTCTATTA CGATTTCGAC CGGGCGGAGC CCTTCACCCC CGAGGATCTC
GGCGCAATCG AGGCCAAGAT GAAAGAGATC ATCAACGCCC GCGATCCCGT CCGCACAGAG
GTCTGGGACC GTCCCCGCGC CATCGCCCAT TACGAGGCGA ATGGCGAGCC CTACAAGGTC
GAGTTGATCG AGGCGATCCC GGGCAACGAG CCGCTGCGCA TGTACTGGCA TGGCGATTGG
CAGGATCTCT GCCGCGGCCC GCACCTGCAA CATACCGGGC AAGTGCCCGC GGACAGCTTC
AAGCTGATGT CCGTCGCGGG GGCCTATTGG CGCGGGGACA GCTCCCGTCC GATGCTGCAA
CGGATCTACG GCGTGGCGTT CCAGAACCGC GACGCCCTGA AAAAACACCT CCACATGCTG
GAGGAAGCCG CCAAGCGCGA TCACCGCAAG CTCGGCCGCG AGATGAACCT GTTTCACATG
CAGGAAGAGG CCCCCGGGCA GGTCTTCTGG CACCCTAACG GCTGGACCGT CTACACCACG
TTGCAGGACT ACATGCGCCG CCGTCAGCGC GAGAATGGCT ATGTGGAGGT CAACACCCCG
CAGGTCGTCG ACCGCAAGCT GTGGGAGGCC TCCGGCCACT GGGACAAGTA CCAGGAAAAC
ATGTTCATCG TCGAAGTGGA CGAAGAACAT GCCCGCGAAA AGGCGATCAA TGCCCTGAAA
CCGATGAACT GCCCCTGCCA TGTGCAGGTC TACAACCAGG GCCTGAAATC CTACCGCGAC
CTGCCCCTGC GCATGGCCGA ATTCGGCGCC TGCAACCGCT ATGAGCCCTC GGGCGCGCTG
CACGGGCTCA TGCGGGTGCG CGGCTTCACC CAGGACGACG CCCATATCTT CTGCACCGAG
GACCAGATCC AGGACGAGAC CGCCCGCTTC ATCCGGATGC TGAGCACGAT CTATCGCGAC
CTGGGTTTCG AGAGCTTCGA CATCAAGTTC TCCACCCGCC CCGAGGTCCG CGCAGGCTCC
GACGCGGTCT GGGACAAGGC CGAGGCCGCG CTGGAGGCCG CGATCCGCAC GGTGACGGAC
GATTTCGAAC TCGATCCGGG CGAAGGCGCG TTCTACGGGC CGAAGCTCGA CTTCAAGCTC
ACCGACGCCA TCGGCCGCGA ATGGCAGCTG GGCACCTTCC AGGCCGATTT CGTGCTGCCG
GAACGGCTCG ATGCCACCTA TATCGGCGAG GACGGCGCGA AACACCGCCC CGTCATGCTG
CACCGCGCGA TCCTGGGCTC CTTCGAGCGG TTCCTCGGCA TCCTGATCGA GAACTTCGCA
GGCAAGCTGC CCTTCTGGCT CGCCCCGCGC CAGGTGGTCG TCGCCTCGAT CATCTCCGAG
GCCGATGATT ACGTGCGCGA GGTGGTGGCG GCCCTCACCC GGGCGGGCAT CCGCGCCGAG
GCCGACATCC GCAACGAGAA GATCAACTAC AAGGTGCGCG AGCACAGCGT CGGCAAGGTG
CCCGTGATCC TCGCCGTGGG CCGCCGCGAG ATGGAGGAAC GCACCGTCAC CCTGCGGCGG
CTGGGCGAAA AGCAGACCTC GGTCGTGGGC CTCGATGCGC TGGTGGCGGA TCTTGCCGCC
GAAGCGACCC CGCCGGACCA GCGCCCGGAT CAACCCGCCG TCTGA
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| Protein sequence | MAQISLTFPD GNARDFDAGV TPAEVAASIS TSLGKKAISA TVNGAHHDLQ WPIDADASIA
IHTLKDDAQA LELIRHDCAH IMARAVQEIW PDVKVTIGPV IENGFYYDFD RAEPFTPEDL
GAIEAKMKEI INARDPVRTE VWDRPRAIAH YEANGEPYKV ELIEAIPGNE PLRMYWHGDW
QDLCRGPHLQ HTGQVPADSF KLMSVAGAYW RGDSSRPMLQ RIYGVAFQNR DALKKHLHML
EEAAKRDHRK LGREMNLFHM QEEAPGQVFW HPNGWTVYTT LQDYMRRRQR ENGYVEVNTP
QVVDRKLWEA SGHWDKYQEN MFIVEVDEEH AREKAINALK PMNCPCHVQV YNQGLKSYRD
LPLRMAEFGA CNRYEPSGAL HGLMRVRGFT QDDAHIFCTE DQIQDETARF IRMLSTIYRD
LGFESFDIKF STRPEVRAGS DAVWDKAEAA LEAAIRTVTD DFELDPGEGA FYGPKLDFKL
TDAIGREWQL GTFQADFVLP ERLDATYIGE DGAKHRPVML HRAILGSFER FLGILIENFA
GKLPFWLAPR QVVVASIISE ADDYVREVVA ALTRAGIRAE ADIRNEKINY KVREHSVGKV
PVILAVGRRE MEERTVTLRR LGEKQTSVVG LDALVADLAA EATPPDQRPD QPAV
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