Gene Dshi_0750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0750 
Symbol 
ID5711185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp760995 
End bp761789 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content64% 
IMG OID641266658 
Producthypothetical protein 
Protein accessionYP_001532096 
Protein GI159043302 
COG category 
COG ID 
TIGRFAM ID[TIGR03370] variant PEP-CTERM putative exosortase signal, Roseobacter type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000298502 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.677809 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTCA AGACAGGACT ACTGGCGACC GCAACGGCGC TGGCCCTCGG GGCGGCACCG 
GTCTGGGCGG TTTCGATTTC GGTGCAGGAA TTCGACGCGA CCAACTTTGG TTTCATCGAG
GGGCTCGGCA CGTTCACCGA AGAGGACTTC GAGAACCTCG GGCCGGGCGG TGGAGCGACC
GTCGAGGGTC AGGTCGGCTT CCAGGGCTCG CCATTGTCCA CCGCCGTGGG CAACTTCGAA
ACGGTCGGCG GCACAGGCGG TGGCGGGACC GTGACGGGAA GCGGCTTTCC GAATGACGGG
ACCGGGCTCG CCCTGCGCGA CGGGACCGTG TTCGGACGTA CCAACAAGAT TCCCACGACC
GGGACGTGGT TCCTCGACAG CAACGATACC CACGGGATCG AGTGGGATGT GTCCCTCGGG
GGAGCTTCCT TCGACGCGAT CTTTTTCACC CTGACCGATG GTAGCGACCA GGGCGCATTC
CTTCGGATCG ACGCGGGTGG CGGCAACACG TTCGAGCAAC GCGTCGGTGG AAAACTGCCC
GATGGGAATT CCAGCATCGT CGTGATCGAA TTCAGTAGCG CAGTGACCGC TGCGGATATC
GATTTCTTCA ACTTCGAGTC GGATGGCGTG ACCTTTCGCG AAGACGACGG TTTCTCGCTT
GACGGTATGA GAGTGGGCAT CGGTGGTCCG GGCTTCGGGG CGCCGCCCGC GCCGGTTCCG
TTGCCGGCGT CTGGTCTGTT GCTGATCGGG GCGCTTGGAG CGGTGGCCTT GCGGGCACGC
AAAGCCCGCG GCTGA
 
Protein sequence
MTFKTGLLAT ATALALGAAP VWAVSISVQE FDATNFGFIE GLGTFTEEDF ENLGPGGGAT 
VEGQVGFQGS PLSTAVGNFE TVGGTGGGGT VTGSGFPNDG TGLALRDGTV FGRTNKIPTT
GTWFLDSNDT HGIEWDVSLG GASFDAIFFT LTDGSDQGAF LRIDAGGGNT FEQRVGGKLP
DGNSSIVVIE FSSAVTAADI DFFNFESDGV TFREDDGFSL DGMRVGIGGP GFGAPPAPVP
LPASGLLLIG ALGAVALRAR KARG