Gene Dshi_0737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0737 
Symbol 
ID5711172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp743834 
End bp744517 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content66% 
IMG OID641266645 
Productheat shock protein DnaJ domain protein 
Protein accessionYP_001532083 
Protein GI159043289 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1076] DnaJ-domain-containing proteins 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.120141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTCT GGACCCGCAT CGCTGACGCC ATTTCGGCCT ATCGCTCCGG CGAAAACCTG 
TCTTCGGTGT TCGAGAAACT GCGCTCTCCA CCCGAGCGGA GCGTGGCCTT CACCATCGCG
GTGATCGCGC TGAGCGCCAA GATGGCGAAG GCCGACGGGC TGGTCACCCG GGACGAGGTG
ACGGCCTTCC GCGAGGTGTT CACCATCGCG CCCGCCGACG AGCCCCACGC CGCCAAGGTG
TTCAACCTGG CGCGCCAGGA CGTCACCGGG TTCGAGATCT ACGCCAGCCG GATCGCCGAG
ATGTTCGCCG ACGATCCCGA CACGCTGACC GATCTGATGG AGGGGCTCTT TCACATCGCC
ATGGCCGACG GCACCTACCA CCCGGCGGAG AACGCCTTTC TGGCCGAGGT GGGCGAGATT
TTCGGGCTGA GCGAGACCTG TTTCCGCCGC CTGCGCGCGC AGCATGTGCC CGACGCGGTG
CCGGACCCCT ATGACATCCT CGGGATCGCC CCCGATGCAC CGCTGGCAGA GGCGCGCAAG
GCCTGGCGCG CGCTGGTGCG CGAAACCCAT CCCGACCGGA TGATGGCAAG AGGCGTGCCC
GAAGAGGCGG TGAAACTCGC CGAGCGCAAG CTCATCGCGA TCAACCGCGC CTGGGAAGAA
ATCCAGCAGG TGAAATCCGC CTGA
 
Protein sequence
MSLWTRIADA ISAYRSGENL SSVFEKLRSP PERSVAFTIA VIALSAKMAK ADGLVTRDEV 
TAFREVFTIA PADEPHAAKV FNLARQDVTG FEIYASRIAE MFADDPDTLT DLMEGLFHIA
MADGTYHPAE NAFLAEVGEI FGLSETCFRR LRAQHVPDAV PDPYDILGIA PDAPLAEARK
AWRALVRETH PDRMMARGVP EEAVKLAERK LIAINRAWEE IQQVKSA