| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0713 |
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| Symbol | |
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| ID | 5711148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 721072 |
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| End bp | 721935 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641266621 |
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| Product | poly(3-hydroxybutyrate) depolymerase-like protein |
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| Protein accession | YP_001532059 |
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| Protein GI | 159043265 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGACC ATTCCTTCCT GTCCAGGATC TGGCAGGCCC TGAAGGCCGC GCTCCTGTCG
ATCTTCGGTC TGCTCAGCTT CGGCACGTCC GCCGCCCCGG CCCGGGGCCT CGACGAGATG
GCGCTGCAGG GGCGTGAATT TCTGCTCTAC CGCGCCGAGA GCGTGCAGGG GCAGGCCGCG
CCGCTGGTCA TGGTGCTCCA TGCCGGGTTT CAGAGCGGTG AGAAGATGTA CGAGACCCTG
CCCCTGGCCG AGGCGGCGGA GCGGGTGGGC TTCAACCTGG TCTATCCCAC GGGCACGGCC
CTGAAGCTGA ACCGCAGCGG GCCGATGATG GAGGCGCGCG GCGGCATGAA CGCCTGGAAC
GCGGGGATGG AGGGGCGCGG GGCCATCGAC ACCACGGTGC AGGATGTCGC CTACCTGGAG
AACATCATCC TCGCGCTGGT CGAGCAGGGG CTGGCGGACC CGGACCGGAT CACCGTCGTG
GGCCATTCCA ACGGGGCGAT GATGGCCTAC CGGCTGGTCT GCGAACGGCC CGGGCTGGTG
CAGACGGTGA TCGCGATCTC GGGCACCCCG GCGATCGATC GGTGCATGGG GCCGCTGCGG
GGGCTGCGTA TCCTGCATAT CCACGGCACC GAGGACGAGA ACCAGCCCGC CCAGGGCGGG
GTCGGGCCGA AGGGCGTGTC GGGGCACAAT GCGCGCTCGG TCGCCGACAC GGTCGAGATG
ATGCAGCGCG CGGGCGCCGA GATCCAGGTG CGGCTGGTGG AGGGGGGCGG CCACCGGATC
GACACGCTCG ACGGGTTGCT GCGCGATCAG TACGGGGCCG ATATTCTGAC CACGGTGGCG
GAGGTTGTGG CGGCCACGCG GTAG
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| Protein sequence | MSDHSFLSRI WQALKAALLS IFGLLSFGTS AAPARGLDEM ALQGREFLLY RAESVQGQAA
PLVMVLHAGF QSGEKMYETL PLAEAAERVG FNLVYPTGTA LKLNRSGPMM EARGGMNAWN
AGMEGRGAID TTVQDVAYLE NIILALVEQG LADPDRITVV GHSNGAMMAY RLVCERPGLV
QTVIAISGTP AIDRCMGPLR GLRILHIHGT EDENQPAQGG VGPKGVSGHN ARSVADTVEM
MQRAGAEIQV RLVEGGGHRI DTLDGLLRDQ YGADILTTVA EVVAATR
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