| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0664 |
|---|
| Symbol | fixP |
|---|
| ID | 5711500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 668033 |
|---|
| End bp | 668896 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641266573 |
|---|
| Product | cytochrome c oxidase |
|---|
| Protein accession | YP_001532011 |
|---|
| Protein GI | 159043217 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
|---|
| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAACA AACCCGACGA CCACCAGAAG GAACCACCCA CCACGGGACA TTCGTGGGAC
GGGATCGAAG AATACGACAA CCCGATGCCG CGCTGGTGGT TGTGGACCTT CTACGCCACC
ATCGTGTGGG CGATCCTCTA CACCATCGCC TATCCGGCCT GGCCCCTGAT CAAGGGCGCG
ACGCCCGGGC TTCTGGGGTA TTCCACCCGG GCCGAGGTCG CCCAGGAGAT TGCCCTGTTC
GAGGCCGCGA ATGCGGAGCT CGACACGCAG CTGGCCTCGG CGGACCTGAC CACGCTGCCC
GAGAACGAAG AGCTTTACAG CTACGCGGTC TCCGGCGGGG CTGCGGTGTT CCGGACCTGG
TGCGCACAGT GCCACGGCTC GGGGGCTGCG GGGGCGGTCG GCTATCCCAA CCTGCTGGAC
AATGCCTGGC TCTGGGGTGG GTCGATCGAG GATATCCGTC ACACGATCGC CCACGGGATC
CGGAACGAGA ACGATCCGGA TGCCCGCTGG TCCGAGATGA CGGCGTTCGA CGAGATCCTG
TCGGATGAAG AGATCGCATC GGTGGTGCAG TATGTCATGA GCCTGTCGGG CACGGAAACC
GATGCCACCC TGGTGGCGGC GGGCGAGCCG GTCTATCTCG ACAATTGTGC CGCCTGTCAC
ATGGAGGACG GCACCGGCGA CATCTATGGT GGGGCGCCGA ACCTCACGGA CGCGATCTGG
CTCTATGGCG GCGATGCGGC CAGCATCGAG GAGACCGTGC GCTACTCCCG CTTCGGTGTG
ATGCCGAGCT GGATCGACCG GCTCTCCGAG GCCGATGTGG CCGCCGTGGC CACCTATGTC
CACCAGTTGG GCGGCGGGGA GTAA
|
|---|
| Protein sequence | MSNKPDDHQK EPPTTGHSWD GIEEYDNPMP RWWLWTFYAT IVWAILYTIA YPAWPLIKGA
TPGLLGYSTR AEVAQEIALF EAANAELDTQ LASADLTTLP ENEELYSYAV SGGAAVFRTW
CAQCHGSGAA GAVGYPNLLD NAWLWGGSIE DIRHTIAHGI RNENDPDARW SEMTAFDEIL
SDEEIASVVQ YVMSLSGTET DATLVAAGEP VYLDNCAACH MEDGTGDIYG GAPNLTDAIW
LYGGDAASIE ETVRYSRFGV MPSWIDRLSE ADVAAVATYV HQLGGGE
|
|---|
| |