| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0591 |
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| Symbol | mreD1 |
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| ID | 5712045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 581261 |
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| End bp | 582400 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641266494 |
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| Product | rod shape-determining protein MreD |
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| Protein accession | YP_001531938 |
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| Protein GI | 159043144 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0772] Bacterial cell division membrane protein |
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| TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTATC TCGAGTCACA GATTCAGCGG GTCCCCACCG GGCTCGCCAA GGTGCTGCAC
CTCAACTGGG GGCTCATTCT GCTGATCGTC GCGGTGGCCA GCTTCGGGTT CCTGATGCTC
TATTCCGTGG CGGGCGGATC CATGACCCCG TGGGTCGAGC CGCAGATGAA GCGGTTTGCC
CTCGGATTGG CGATCATGTT CGTGGTCGCC TTCACGCCGA TCTATGTCTG GCGCAACCTT
TCGGTGCTGG CCTATATCGT GTCGCTCGTC CTGCTGCTGG CGGTGGAATT CTTTGGCGTG
GTCGGCATGG GCGCCCAGCG CTGGATCGAT CTCGGCTTCA TGCGCCTGCA GCCTTCGGAA
CTGATGAAGA TCACTCTGAT CATGCTGCTG GCTGCCTATT ACGACGTGCT GGATCTGAAG
AAGACCTCCC ACCCGTTCTG GGTGCTTGTC CCCGTGCTGC TGATCATGAT CCCTGTTGCC
CTGGTGCTCC GCCAGCCGGA TCTCGGCACT TCGATCCTGC TGATGGCCGG GGGCGGGGTT
GTGATGTTCG TCGCGGGGGT TCACTGGCTT TACTTCGCGG TGGTGATCCT GGGCGGCATT
GCTCTGGTCG CGGCGGTTTT GATGTCGCGC GGAACCGACT GGCAGCTGTT GCAGGACTAC
CAGTATCGGC GCATCGACAC CTTCCTGAAC CCCGAAAACG ACCCTCTTGG CGCGGGCTAT
CACATCACCC AATCCAAGAT CGCCCTCGGG TCCGGCGGCG TGACGGGCAA GGGGTTCATG
GAAGGCACTC AGAGCCGTCT GAACTTCCTG CCCGAGAAGC ACACCGATTT CATCTTCACG
ACACTGGCCG AGGAGTTCGG CTTCATCGGC GGCATCTCCC TGCTGGCACT TTACGGTCTG
ATCGTACTCT TTTGTCTTGT GTCCGCGATG CGGACCAAGG ACCGGTTCTC CAGCCTGTTG
ATCATCGGTG TGGCCGCGAC CTTCTTCTTC TTTTTCTCCG TGAACATGGC GATGGTGATG
GGGTTGGCCC CGGTGGTCGG CGTGCCCCTG CCGCTGGTCA GCTTCGGTGG CTCTGCGATG
CTGGTGCTGC TGGTCGGTTT TGGCCTGGTC CAGAGCGCTC ATGTCCACCG CCCCAGGTAA
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| Protein sequence | MSYLESQIQR VPTGLAKVLH LNWGLILLIV AVASFGFLML YSVAGGSMTP WVEPQMKRFA
LGLAIMFVVA FTPIYVWRNL SVLAYIVSLV LLLAVEFFGV VGMGAQRWID LGFMRLQPSE
LMKITLIMLL AAYYDVLDLK KTSHPFWVLV PVLLIMIPVA LVLRQPDLGT SILLMAGGGV
VMFVAGVHWL YFAVVILGGI ALVAAVLMSR GTDWQLLQDY QYRRIDTFLN PENDPLGAGY
HITQSKIALG SGGVTGKGFM EGTQSRLNFL PEKHTDFIFT TLAEEFGFIG GISLLALYGL
IVLFCLVSAM RTKDRFSSLL IIGVAATFFF FFSVNMAMVM GLAPVVGVPL PLVSFGGSAM
LVLLVGFGLV QSAHVHRPR
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