| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0570 |
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| Symbol | fhuA |
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| ID | 5712023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 558999 |
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| End bp | 561026 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641266472 |
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| Product | ABC-type cobalamin/Fe3+-siderophores transport system protein |
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| Protein accession | YP_001531917 |
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| Protein GI | 159043123 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.168599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAAAC AGGCACTTAC CATCACGACT GTTCTCGTAA CCGCCACTGG GCTATCTGCG
CGGATCAGCG CCGCGCAGGA CGCCACAGCC CTGGAAGCCA TCACCGTCCT GGGCACCGGT
TTGCCGACCT CTGTCTTCGA AAGCCCATCC AGTGTGACCG TGATCGATGA CGGTCAGTTG
CGCCGCATCG CGCCTGAGAA GATCGGCAGT TACCTCGAAA GCGTCCCGGG CGTCATCATC
GGCGAACAGG GCATCCAGCG TATTCAGATC CGGGGCGAGG CGGAGCGCCG GGTTCTGATC
AAGGTCGATG GGCAAGCCCT GACCGACCAC ACGACCTATG GGCAGCCTGT GCTGGTGGAT
CCGCTCAACA TCGAGCGGAT CGAGGTGATC CGGGGGGCGT CGTCGGTGGT CTCGGGCTCG
CGCGCCATTG GCGGGGTGGT CAACATCGTG ACCAAACGCG GCGCGCCCGA CACCGCGGCA
GAGGTCACGT TCGGCGCGGG CTATTTCGGC GGCTCGGATG GCTACCGCGC CAGTGGCTCG
GTCGGGGGCA CCATCGGGGC CTTCGATTAC CGGATTACGG CCGGAACGGC CGATTTCGGG
GACCGCGAGA CGCCCGATCG CACGCTGGTG CCTTCGGAAA GTGCCAGTGA CAGCCTCGCC
GTGCACCTGG GATACCAGAT CGATCCGAAC CAATACGTGA TGTTCAAAGC CCAGCGTTAC
GATCAATCGG CGGATGTCTT CACCGACGAT CCCGATTTCA CGATCACCTT GCCCAATCGG
GATCTCACGA AATACTCGGC TTTCTATGAA GGGACGGACC TCGCGCCCTG GATGCCGAAG
CTGAACGCGG ATGTCTATTA TCAGACCGTC GACCGGGTTT TCGAAAACGA TGTGAATACT
GGTGTGCCGC CGTTCGTGCC GAATGCGCCG ACGAACATTC AGGGCCTGAG CGATGACGAG
GGCAGGACCT GGGGGCTGAA TGTGACAGCC GAGTTGTCGA TTTTCGACAT CGGGCGCAGC
TTTGTCGGGT TCGAGTATGA AGACGACCGT CTCGACACCG CGCGCAGTTC GATTGTCACG
GCAAACCCGC CTCCCGGCCC GCCGGGACCG CCGGTTGTGA GTGTCGATAG CCGCGAGGAA
GATGCGAGCA TCAAGACCAC TTCCCTCTAC GCCTTGCAGG AATTCGATCT CTCCGACACG
GTCACGGGCT TTCTGGGCGG GCGGTATTAC GCGGTGGATG CAGAGCTTAT CCGCAGCACG
CGCAGTGCCC CGCGGTCCAA TGACGACGAC AGGTTTCTCG GCTCCGCCGG ACTGGTCTGG
ACCCCGAATC CCGAGACGGC GCTGCGCCTG AATATCTCGC AAGGCTACAG TTATCCGTCG
CTGGGCCAGC TTTTCCTCGA AACTTCCGCA GGCGGCCAAA CGGTCATCGG CAATCCCGAT
CTGGAGCCGG AGACTGCCAC CACGCTGGAG CTGGGCGCGC GCTATGACGG GGCGGGCGCA
ACCATCGATG CCACGTTCTT CTATACCGAC AGCTCCGACT ACATCGAGTT GACAGGGGCA
GGTGGCGGCA CGCTGAGCTA TACCAACATC GCTGCAGCCG AGGCCTTCGG GCTTGAGGTT
CTGGCCGAAA CCCGGATTGG GGCAAGCAAT TGGTCGCCCT ACGCCTCGCT GACCTATGTG
CGGCGGGAAT TCGATTTCGG CAACGGGTTC AAGACCAAGG ATTCAGGCAC GCCCGAACTG
TTCGGTCGCG TCGGTGTGAA ATACGATTTT GACTGGTTCG GGATGACCGG GGTGCTGGAC
GCGCATGTGC GGGGTGAAAC CTCTGCCACC TTGCGGGACG AGACCGGCGC AGTGGTGCGG
TCCGGCGACG GGTTCGGCTT GCTGGAGGTC GATGCCTTCG TCAACATCAG CGAGAACGCG
TCGCTGACGG TTGCGCTGAA CAACCTGTTG AACACGACCT ATGATCCGAT CGACCAGATC
GAGGGACAGA AGCGGTCGGT TGACGTGTTC CTGACCTGGA CCTTCTGA
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| Protein sequence | MLKQALTITT VLVTATGLSA RISAAQDATA LEAITVLGTG LPTSVFESPS SVTVIDDGQL
RRIAPEKIGS YLESVPGVII GEQGIQRIQI RGEAERRVLI KVDGQALTDH TTYGQPVLVD
PLNIERIEVI RGASSVVSGS RAIGGVVNIV TKRGAPDTAA EVTFGAGYFG GSDGYRASGS
VGGTIGAFDY RITAGTADFG DRETPDRTLV PSESASDSLA VHLGYQIDPN QYVMFKAQRY
DQSADVFTDD PDFTITLPNR DLTKYSAFYE GTDLAPWMPK LNADVYYQTV DRVFENDVNT
GVPPFVPNAP TNIQGLSDDE GRTWGLNVTA ELSIFDIGRS FVGFEYEDDR LDTARSSIVT
ANPPPGPPGP PVVSVDSREE DASIKTTSLY ALQEFDLSDT VTGFLGGRYY AVDAELIRST
RSAPRSNDDD RFLGSAGLVW TPNPETALRL NISQGYSYPS LGQLFLETSA GGQTVIGNPD
LEPETATTLE LGARYDGAGA TIDATFFYTD SSDYIELTGA GGGTLSYTNI AAAEAFGLEV
LAETRIGASN WSPYASLTYV RREFDFGNGF KTKDSGTPEL FGRVGVKYDF DWFGMTGVLD
AHVRGETSAT LRDETGAVVR SGDGFGLLEV DAFVNISENA SLTVALNNLL NTTYDPIDQI
EGQKRSVDVF LTWTF
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