| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0494 |
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| Symbol | nnrS |
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| ID | 5711410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 478748 |
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| End bp | 480028 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641266398 |
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| Product | NnrS family protein |
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| Protein accession | YP_001531843 |
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| Protein GI | 159043049 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3213] Uncharacterized protein involved in response to NO |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.506659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.505655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTGCG GCCCCGCCAC CGGGCGCAGC CGACCCCTGC CCCGGGGTCC GCTCGCCACC
CTCGGCGATG AGGGGTTTCG CCTGTTCTTT CTGCTGGGGG CGCTCTACGC GGCGCAGTTC
CCCGCGCTCT GGGTCCTCGC ATGGGGATTG GATCTGCCGA TGGCGCAGGA CGTGCCCCCG
GCCCTCTGGC ACGCCCATGA AATGCTGATC GGGGCGTTCG GCGCCGCATT GATCGGCTTC
GTCACCACCG CCGCGCCGGA ATGGACCGAT ACCGAGCCGC CACGGGGTCG CCCGCTCTGG
GCGCTGGCGG GGCTCTGGGC GGTCGGGCGC ACCGTTGGAC TTTTCGGCTG GGATGCGTTC
GGGGCCGTCG GCGCACTGGC GGATCTCGGC TGGATGTGCG CGCTGACCGT TTGGCTGGGG
GTCCTGTCGA TCCGCCGACG CACCGACCGG CTGGTCGCCT TCATCGCCTG GCTGGCGATC
CTCACGGTCT GTACGGCCGT GGGCCACTTC GGCTTTGCCA CCGGAAATCT CACTCTGGCA
ACCCAGAGCA TTCACCTCGC CGGGTTCGCC CTTCTGGGGC TTCTGGGCCT CGCCTTGTCG
CGGATTACCG CGCCAGTGAC GAACCTCGTG CTCGATCCGA CCGAGCGAAC CTCGCCCTTC
CGGCCCCATC CCGGTCGATT GCATCTTGCG CCCGGCCTAG TCCTCGTGGT GATGGCGGGC
GACCTGCTCG GTGTCAGTCC CGCAGTCTCC GCCTGGCTAT TGGTCGCCGC CGGGGCAGCG
TTCATGGACC GCGTCGGCGA AGCTTTCATC GGGCGCGAGA TTGCCATGGC CGAGATTCTC
TTGCTTGCAG GCTCCAGCGC GCTGGCGGGA CTCGGCCTCA TCCTCGCGGG GGCTGCGCGT
CTCGGGGCAC CCTGGCCGGA GGTCACGGGG TTGCACATCG CCTTCATGGG CGGTCTCGGG
CTTGGCGTCT ATGCGGTCTA CTGCATCGCG GGCCTTCTGC ACACGGGCCG GCCGCTCGGC
CTGTCGCGCG CTGCCCGGCT CGGCGCCGGG ATGCTGGTCG CATCCGTCAT GCTCCGTGTG
GCGCCTGATC TCGGCCTGTC CCTGCCCCTT CCTGCGCCCG CGCTTGCCTC CGGGACCTGG
ACGGCTGCCT TCCTGCTGTG GGCGATAGCC TACTGGCCCG CCCTGTCCCG CGTCGCCCTG
CCGGAAGGTC CGCCGGACCG GGCCGCGTCG AAACCTCACC TGCCCGCCGC ACCCGTCCGG
TTCCCCGAGG CGGCGGAATA G
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| Protein sequence | MSCGPATGRS RPLPRGPLAT LGDEGFRLFF LLGALYAAQF PALWVLAWGL DLPMAQDVPP
ALWHAHEMLI GAFGAALIGF VTTAAPEWTD TEPPRGRPLW ALAGLWAVGR TVGLFGWDAF
GAVGALADLG WMCALTVWLG VLSIRRRTDR LVAFIAWLAI LTVCTAVGHF GFATGNLTLA
TQSIHLAGFA LLGLLGLALS RITAPVTNLV LDPTERTSPF RPHPGRLHLA PGLVLVVMAG
DLLGVSPAVS AWLLVAAGAA FMDRVGEAFI GREIAMAEIL LLAGSSALAG LGLILAGAAR
LGAPWPEVTG LHIAFMGGLG LGVYAVYCIA GLLHTGRPLG LSRAARLGAG MLVASVMLRV
APDLGLSLPL PAPALASGTW TAAFLLWAIA YWPALSRVAL PEGPPDRAAS KPHLPAAPVR
FPEAAE
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