Gene Dshi_0466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0466 
Symbol 
ID5711382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp451045 
End bp452202 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content58% 
IMG OID641266370 
Productdomain of unknown function DUF1745 
Protein accessionYP_001531815 
Protein GI159043021 
COG category[S] Function unknown 
COG ID[COG3287] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGATC ACCTCTCCGA CCCTTCGATC ATTCAAGTTG CCGTCTCTCG TGCGACGGCT 
CCCCAGGCCG CAGCCGATGA TGCGGCCTCC AAGATCAATT TGCCGGAGAC ACGCTTTGTG
CTTGCTTTCG TACCTGGCGA AATGCCGGGC GACGAAGTGG CAGCTGCGCT CGACACTGCC
TTGGACGGGG TGCCTGTCTT TGGCTGCTCG ACCGCAGGGC AGATCACGGA CAAGGGCTAC
GAAACTGAAG CGCTGCTGCT ATTGGCCTTT CCCAAGAAGC ACTTTCGGTG TTCATCCTTG
ATGCTCGCGC CGCTCGATCC AATTTCACCC ACGGCGCTGG CCACGACTGC GCAACGTCAC
GAAAACGAGT TTCAGCACAC AGCGGGTTGG AACCGGTTGG GACTGATCTT CTCAGACGGG
GTGTCACAGC AAGAAGATGT GCTTGTGTCC ACCCTTGAGG CCGTATTGAG CGATTTACCC
ATCTTTGGCG GTTCGGCCGG GGACTCCCTA CGCTTCGAAA AGACGTTCGT CTTGCACAAG
GGAGCGTCGC ACAGCAACTC GGCAGTTCTC TTGATCCTGG AAACAGATCT CGAGTTTCAG
GGATTAGGGT TTGACCATTT CCTGCCTTCC GGCGCGCCCT TGGTGATCAC CGGCGCGGAC
CCGGAGGCCC GAAAGGTCTA TGAGATCAAT GGCGCGCCGG CAGCAGAGGA ATATGCACGA
CTGGTCGGCT GCAAGCTTGG AGATCTATCG CCGAAGGTCT TTGCGGAGAA CCCAATGCTT
GTGCAGTATC GCGACCGTCA TTACGTCCGC GCGATTTCTG ACGCGGATGA TGCGGGGGCG
TTGTCTTTCA TGGCAGCGAT CGACGATGGC CTGATCATGA CCCTGGGCAA AGGCCAAGAA
ATCCTGCAGA CCCTTGAAAC CGGGCTGCGC CGCCGGGACA GGCGTGGCGA GAGGCCCGAT
TTCATCCTCG GATTTGACTG TGTGCTGCGC AAGCTTGAGA TCGAGCAAAA GCAACTGGCA
CGGGCGGTAT CGAACATCCT GTGCTCGTCG CGGGTGTTCG GATACAATAC ATACGGCGAA
CAATACTGCG GCGTCCATAT GAACCAGACC TTCGTGGGCG TCGCCTTCTT CAAGTCGGAT
CAGGGCTATA TCATATGA
 
Protein sequence
MRDHLSDPSI IQVAVSRATA PQAAADDAAS KINLPETRFV LAFVPGEMPG DEVAAALDTA 
LDGVPVFGCS TAGQITDKGY ETEALLLLAF PKKHFRCSSL MLAPLDPISP TALATTAQRH
ENEFQHTAGW NRLGLIFSDG VSQQEDVLVS TLEAVLSDLP IFGGSAGDSL RFEKTFVLHK
GASHSNSAVL LILETDLEFQ GLGFDHFLPS GAPLVITGAD PEARKVYEIN GAPAAEEYAR
LVGCKLGDLS PKVFAENPML VQYRDRHYVR AISDADDAGA LSFMAAIDDG LIMTLGKGQE
ILQTLETGLR RRDRRGERPD FILGFDCVLR KLEIEQKQLA RAVSNILCSS RVFGYNTYGE
QYCGVHMNQT FVGVAFFKSD QGYII