| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0440 |
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| Symbol | atpE1 |
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| ID | 5711356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 430175 |
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| End bp | 430465 |
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| Gene Length | 291 bp |
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| Protein Length | 96 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641266344 |
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| Product | F0F1 ATP synthase subunit C |
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| Protein accession | YP_001531789 |
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| Protein GI | 159042995 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0636] F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K |
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| TIGRFAM ID | [TIGR01260] ATP synthase, F0 subunit c
[TIGR03322] alternate F1F0 ATPase, F0 subunit C |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.100541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGATC TTGCCATCAT TGCCGCCGTG TCCATCTTCA CCGCCGGGTT GACCATCGCC
ATCGGCGCCA TCGGCCCGGC GCTTGGCGAG GGGCGCGCGG CGTCGACCGC CCTGAGCGCC
ATCGCGCAGC AGCCCGACGC GGCCTCGACC CTGTCGCGGA CATTGTTCGT CAGCCTTGCG
ATGATCGAAT CCACCGCGAT CTACTGCTTC GTGGTGGCGA TGATCCTGAT CTTCGCCAAC
CCGTTCTGGG AGGCCGCGCT GGAGGCTGCC ACCGTCGGCG CCGGAGGCTA G
|
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| Protein sequence | MTDLAIIAAV SIFTAGLTIA IGAIGPALGE GRAASTALSA IAQQPDAAST LSRTLFVSLA
MIESTAIYCF VVAMILIFAN PFWEAALEAA TVGAGG
|
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