| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0380 |
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| Symbol | livK |
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| ID | 5711289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 362188 |
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| End bp | 363468 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641266278 |
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| Product | high-affinity branched-chain amino acid transport system periplasmic binding protein livK |
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| Protein accession | YP_001531730 |
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| Protein GI | 159042936 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0649125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA CCCTGACGAG CATGGCCGTG GCCGCCACGA TGGTGGCCGC ACCCGTGATG
GCGGACCTGG TGTACCCGTC CCTGTCCTAT CGGACCGGGC CCTATGCGGC GGGCGGCATC
CCGTTCGCCG ATGGCTACGC GGATTACTTC ACCCTACTGA ACGAGCGCGA TGGCGGGATC
GGTGGCGTGA TGACCCGCGT TCTGGAATGC GAGACCGGCT ACAACACCCA GAAGGGGGTG
GAGTGCTATG AGAGCACCAA GGGCGAGGGC TCGCTGGTCT ATCAGCCGCT GTCCACGGGC
ATCACCTATC AGCTGATCCC CAAGGCCACC GCCGATGGCA TCCCGCTGCA CACCATGGGC
TACGGGCGGA CCTCTGCGGC CAATGGCACG GTGTTCAGCC ACGTGTTCAA CTACCCGGCG
AACTACTGGG ATGCGGCCTC GGTGGCGGTG AACCACCTTC TAGGCGAGTA CGAGTCGCTG
GAGGGCAAGA CCATCGCGCT GCTCTACCAC AACTCCGCCT ATGGCAAGGA GCCGATCCGG
ACCCTCGAAG AGCTGAGCGC CAAGCACGGG TTCGAGCTGA CCACCATCGC GGTGGATCAC
CCGGGCCAGG AGCAGAAATC CCAGTGGTTG CAGATCCGCC GGGAGCGGCC CGATTACGTG
GTGATGTGGG GCTGGGGCGT GATGAACCAG GTCGCGGTGC AGGAAGCCGC CAATATCCGC
TTCCCGATGG AGAACTTCAT CGGCAACTGG TGGGCCGGGT CCGAGAACGA CGTGATCCCC
GCGGGCATGG CCGCCGATGG CTACAAGTCG CTGGCGATGC ACAGCGTGGG CGATGATTTC
CCGATTTACG AGGACCTCAA GACCCATGTC TTCGACAAGG GCCTCGCGGC CGGCGCCGGG
GACCAGCATG GCACGGTGCT TTACAATCGC GGGCTCTATG CGGCGATGCT CGCGGCCGAG
GCCACCCGCA AGGCGCAGGA GATCCACGGG GTCGCGGACA TCACCCCGGC GATGATGCGC
GACGGCATGG AGGCCCTGGA AATCACCGAG GCCCGCATGG CCGAACTGGG CATGCCCGAT
TTCGGCCCGG CCTTCTCGGT CAGCTGCGAG GATCACGGCG GCTCCGGCGC GGCCAAGATC
CAGCAATGGG ATGCCGACAC CCAGACCTGG ACCGTGATCT CCGACTGGAT CGCCCCCGAT
GCCGAGGTGA TCAACGCGCT CGTGACCGCC GACAGCGAGG CTTTCGCCGC CGAAAACAAC
ATCGAGACGC GGTGTAACTG A
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| Protein sequence | MKKTLTSMAV AATMVAAPVM ADLVYPSLSY RTGPYAAGGI PFADGYADYF TLLNERDGGI
GGVMTRVLEC ETGYNTQKGV ECYESTKGEG SLVYQPLSTG ITYQLIPKAT ADGIPLHTMG
YGRTSAANGT VFSHVFNYPA NYWDAASVAV NHLLGEYESL EGKTIALLYH NSAYGKEPIR
TLEELSAKHG FELTTIAVDH PGQEQKSQWL QIRRERPDYV VMWGWGVMNQ VAVQEAANIR
FPMENFIGNW WAGSENDVIP AGMAADGYKS LAMHSVGDDF PIYEDLKTHV FDKGLAAGAG
DQHGTVLYNR GLYAAMLAAE ATRKAQEIHG VADITPAMMR DGMEALEITE ARMAELGMPD
FGPAFSVSCE DHGGSGAAKI QQWDADTQTW TVISDWIAPD AEVINALVTA DSEAFAAENN
IETRCN
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