| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0305 |
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| Symbol | secY |
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| ID | 5711555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 295343 |
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| End bp | 296704 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641266201 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001531655 |
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| Protein GI | 159042861 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.398461 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCAG CAGCAGAGCA AATGGCCGCC AACATGAGTT GGTCCGCCCT GGGGAAGGCG
ACCGAGCTTC GGCAGCGGAT CTTCTTCACC CTGGGTCTTC TGATCGTCTA CCGGCTGGGC
ACCTATATCC CGGTGCCGGG GATCGACGGC GCGCAGCTGC GCGAATTCAT GGACCAGGCG
GCCGCGGGTC TCGGCGGCGT TTTGAACATG TTTACCGGCG GTGCGATTTC CCGGATGGGG
ATCTTCGCGC TCGGGATCAT GCCGTATATC TCGGCCTCGA TCATCGTGCA GCTGCTGACC
GCGATGGTGC CCAAGCTCGA ACAACTCAAG AAAGAGGGCG AGCAGGGGCG CAAGAAGATC
AACCAGTACA CGCGCTACGG CACGGTGTTC CTGGCGACCT TCCAGGCCTA CGGGTTGGCG
ATCAGCCTTG AATCGGGCGG TCTGGTGACC GATCCGGGCT GGTTCTTCCG GGCGGCCTGC
GTGATCACGC TGGTGGGCGG GACGATGTTC CTGATGTGGC TGGGCGAGCA GATCACCCAG
CGCGGCATCG GCAACGGCAT TTCGCTGATC ATCTTTGTCG GTATCATCGC CGAGCTGCCC
GCGGCGCTGG CGCAGTTCTT CGAGAGCGGC CGGTCCGGCG CGCTGTCGAC CCCGGTGATC
CTGGGCGTGA TCCTGATGTT GCTGGCGACG CTGGTCTTCG TGGTGTTCAT GGAGCGCGCT
TTGCGCAAGA TCCACATCCA GTATCCGCGC CGCCAGGTGG GCATGAAGAT GTATGACGGC
GGGTCTTCGC ACCTGCCGGT TAAGATCAAC CCCGCAGGCG TGATCCCGGC GATCTTTGCC
TCTTCGCTGC TGCTCCTGCC GACGACGATC AGTACCTTCT CGGGCGGCAA CTCCGGCCCG
ATCATGTCGA CGATCCTGGC CTATTTCGGA CCCGGGCAGC CGCTCTACCT GCTGTTCTTT
GCGGGCATGA TCATCTTCTT CACGTATTTC TACACCGCGA ACGTGTCCTT CAAGACCGAA
GATGTGGCGG ACAACCTCAA GAACCAGAAC GGCTTCATCC CCGGCATCCG GCCGGGCAAG
AAGACCGAGG AATATCTCGA TTACGTGGTC AGCCGCATTC TGGTGGTGGG CTCGGGCTAC
CTGGCCTTGG TCTGCCTCAT CCCGGAAATG GTGCGGACCG AACTGGCGAT CACGGCGTAT
TTCGGCGGCA CCTCGATCCT GATTATCGTG TCGGTGGGTA TGGACACCGT CCAGCAAATC
CAGTCCCATC TGCTCGCGCA TCAATACGAA GGGCTCATCG AGAAGTCCCA GTTGCGCGGC
AAGAAACGCG GCAAAGGGAA GAGGAGCCCG GCACGTCGAT GA
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| Protein sequence | MASAAEQMAA NMSWSALGKA TELRQRIFFT LGLLIVYRLG TYIPVPGIDG AQLREFMDQA
AAGLGGVLNM FTGGAISRMG IFALGIMPYI SASIIVQLLT AMVPKLEQLK KEGEQGRKKI
NQYTRYGTVF LATFQAYGLA ISLESGGLVT DPGWFFRAAC VITLVGGTMF LMWLGEQITQ
RGIGNGISLI IFVGIIAELP AALAQFFESG RSGALSTPVI LGVILMLLAT LVFVVFMERA
LRKIHIQYPR RQVGMKMYDG GSSHLPVKIN PAGVIPAIFA SSLLLLPTTI STFSGGNSGP
IMSTILAYFG PGQPLYLLFF AGMIIFFTYF YTANVSFKTE DVADNLKNQN GFIPGIRPGK
KTEEYLDYVV SRILVVGSGY LALVCLIPEM VRTELAITAY FGGTSILIIV SVGMDTVQQI
QSHLLAHQYE GLIEKSQLRG KKRGKGKRSP ARR
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