| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0302 |
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| Symbol | rpsE |
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| ID | 5711552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 293839 |
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| End bp | 294414 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641266198 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_001531652 |
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| Protein GI | 159042858 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.440819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGAGC GTGACAACCG CCGGGGACGC CGCGACGACC GCGACGAGAC CCCTGAATTC
GCCGACCGCC TGGTCGCGAT CAACCGTGTT TCCAAGACCG TCAAGGGCGG GAAACGCTTC
GGCTTTGCCG CGCTCGTGGT CGTGGGCGAC CAGCGGGGCC GTGTCGGCTT CGGCAAGGGC
AAGGCCAAGG AGGTCCCCGA GGCCATCCGC AAGGCCACCG AGCAGGCCAA GCGTCAGATG
ATCCGCGTGC CGCTGCGCGA GGGTCGGACC CTGCATCACG ACATCGAAGG CCGCCATGGC
GCGGGCAAGG TGATGATGCG TACCGCCCCC CAGGGCACCG GGATCATCGC CGGTGGTCCG
ATGCGTGCCG TGTTCGAGAT GCTGGGCGTG CAGGACGTGG TGGCGAAGTC CATCGGGTCG
CAGAACCCCT ATAACATGAT CCGTGCAACG CTGGACGGTC TCCGCAAAGA GACCAGCCCC
CGCATGGTCG CACAGCGCCG TGGCAAGAAG GTCTCCGACA TCCTCAAGAA GGATGGCGAG
CCCGCCGAAG CCGCCGCCGA GCCGGCCGAA GCCTAA
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| Protein sequence | MAERDNRRGR RDDRDETPEF ADRLVAINRV SKTVKGGKRF GFAALVVVGD QRGRVGFGKG
KAKEVPEAIR KATEQAKRQM IRVPLREGRT LHHDIEGRHG AGKVMMRTAP QGTGIIAGGP
MRAVFEMLGV QDVVAKSIGS QNPYNMIRAT LDGLRKETSP RMVAQRRGKK VSDILKKDGE
PAEAAAEPAE A
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