| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0288 |
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| Symbol | rpsC |
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| ID | 5711538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 286917 |
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| End bp | 287639 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641266184 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_001531638 |
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| Protein GI | 159042844 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAACA AGGTTAATCC CATCGGCATG CGGCTTCAGG TCAACCGGAC CTGGGACAGC
CGTTGGTATG CAGACACCAA GGACTATGGT GACCTGCTGC TCGAGGATCT GAAGATCCGC
GAGTTCATCA AGGAAGAATG CAAGCAGGCC GGCATCAGCC GTGTGATCAT CGAGCGTCCG
CACAAGAAGT GCCGGGTGAC GATCCACACC GCCCGTCCCG GTGTCATCAT CGGCAAGAAG
GGTGCGGATA TCGAAGGTCT GCGCCGCAAG ATCGCGGCGA TGACCGACAG CGAGCTGCAT
CTGAACATCG TCGAGGTCCG CAAGCCGGAG CTGGACGCGG CCCTGGTCGG CGAGAGCATC
GCCCAGCAGC TGGAGCGTCG GGTGTCCTTC CGCCGCGCCA TGAAGCGCGC GGTGCAGAAC
GCCGTGCGCA TGGGCGCGCA AGGCATCCGG GTGAACCTGG CGGGGCGTCT CGGCGGTGCG
GAAATCGCGC GGACCGAGTG GTACCGTGAG GGGCGTGTGC CGCTGCACAC CCTGCGCGCG
GATATCGACT TCGCCAATGT CGAGGCCACC ACGGCCTACG GCATCATCGG GATCAAGGTC
TGGATCTTCA AGGGCGAGAT CATGGAGCAC GATCCGCAAG CGCGCGATCG GCGTCATGCC
GAGCTGCAAG AAGGCGGTGG CCCGCGTCCC CAGGGTGGCG GTCGCCCGCG CCGGGATCGC
TGA
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| Protein sequence | MGNKVNPIGM RLQVNRTWDS RWYADTKDYG DLLLEDLKIR EFIKEECKQA GISRVIIERP
HKKCRVTIHT ARPGVIIGKK GADIEGLRRK IAAMTDSELH LNIVEVRKPE LDAALVGESI
AQQLERRVSF RRAMKRAVQN AVRMGAQGIR VNLAGRLGGA EIARTEWYRE GRVPLHTLRA
DIDFANVEAT TAYGIIGIKV WIFKGEIMEH DPQARDRRHA ELQEGGGPRP QGGGRPRRDR
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