Gene Dshi_0270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0270 
Symbol 
ID5711520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp273419 
End bp274324 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content69% 
IMG OID641266166 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_001531620 
Protein GI159042826 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTGA CAGCCGTTCC CGACCGCGCC GCCGGCAACC TGCGCGGTGC CGCCTACATG 
CTCGTGGTGA CCGCGAGCTT CACCACCGGT GACGCGCTCA TCCGGCTGGC CACCGAAGAG
ATGCCGCTGT TCCAGGTGAT CTTCCTGCGC AGCTGGATCG CGGTGGCCTT CCTGGGGCTG
CTGGTGTGGC GCGCAGGGGC GCACCGGATG CGCGTGGGGC CAAGGGACCG GCGCCTGATC
GGCCTGCGCA GCGCGGCCGA GGTCTGCGCC ATGGTGCCCT TCTTCATCGC CCTGGCGAAC
ATGCCCTTCG CCAATGTCAG CGCCCTGTTG CAGGCGCTGC CCCTGTCCCT GACCTTGGCC
GGTGCGGTGT TTCTGGGCGA ACCCGTGGGC TGGCGGCGGC TGGCGGCGAT CGTCGTGGGG
TTCTGCGGGG TGCTTCTGAT CGTGCAGCCG GGCGGGTCGG GGTTCACCGC CTATGCGCTG
CTGGTGCTGC TCACGGTGGT CTTCGTGACT TTTCGCGACC TGTCCACGCG CCGGATCTCG
CCCGAGATCC CGGCGGTGCT TCTGGGGTTG GTGATGGCGG TGTTCGTGCT GGTCTCCTCG
GGGGTCCTGT CACTGCTGAC ACCGTGGCAG CCGGTGACGG TGCGCGGGGC GCTCCTTCTG
TTCGGGGCGG GGGTATTCAT CGCCTCGGGC TACATCTTCG CGGCTCTGGC CATGCGCCAC
GGCGAGATCG GCTTCGTGAC GCCGTTTCGC TACATGGCGC TTGTCTGGGC GGTGCTGCTG
GGATTTTTCG TCTTCGGCGA ATGGCCCGAT GCGCTGACCT GGGCGGGGGC GCTTCTGGTG
GTGGCGACGG GGCTGTATAC CTTGTATCGT GAGCAGGTGG TCCGCCGGGC GGCGCGGCGG
GCCTAA
 
Protein sequence
MPLTAVPDRA AGNLRGAAYM LVVTASFTTG DALIRLATEE MPLFQVIFLR SWIAVAFLGL 
LVWRAGAHRM RVGPRDRRLI GLRSAAEVCA MVPFFIALAN MPFANVSALL QALPLSLTLA
GAVFLGEPVG WRRLAAIVVG FCGVLLIVQP GGSGFTAYAL LVLLTVVFVT FRDLSTRRIS
PEIPAVLLGL VMAVFVLVSS GVLSLLTPWQ PVTVRGALLL FGAGVFIASG YIFAALAMRH
GEIGFVTPFR YMALVWAVLL GFFVFGEWPD ALTWAGALLV VATGLYTLYR EQVVRRAARR
A