Gene Dshi_0259 details

Gene Information

• Locus tag: Dshi_0259
• Symbol: nusG
• ID: 5712185
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dinoroseobacter shibae DFL 12
• Kingdom: Bacteria
• Replicon accession: NC_009952
• Strand: +
• Start bp: 256673
• End bp: 257206
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 641266155
• Product: NusG antitermination factor
• Protein accession: YP_001531609
• Protein GI: 159042815
• COG category: [K] Transcription
• COG ID: [COG0250] Transcription antiterminator
• TIGRFAM ID: [TIGR00922] transcription termination/antitermination factor NusG

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 52
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCAAAC GGTGGTACTC TGTCAGCGTC CTCTCGAATT TCGAGAAGAA GATCGCCGAG 
CAGATCAAGC ACGCCGTCGC AGAGGCAGGG CTTGAGGACG ACATCGAAGA GGTGCTCGTC 
CCGACCGAAG AGGTCATCGA GGTCCGCCGC GGCAAGAAGG TCACCGCCGA GCGCCGCTTC 
ATGCCCGGCT ATGTGCTGGT GCGGATGGAG ATGACCGACC AGGGCTATCA CCTGATCAAC 
TCGATCAACC GGGTCACCGG GTTTCTCGGC CCCCAGGGTC GGCCCATGGC CATGCGCGAT 
GACGAGGTGA ACCAGATCCT GAACCGGGTC GAGGAAGGCC AGGAGGCGCC GCGCAGCCTG 
ATCACCTTCG ACATCGGCGA ACAGGTCAAC GTGACCGACG GACCCTTCGA GGGCTTCTCG 
GGCAGCGTCG AGGAAGTGGA CGACGACAAC AACCGTCTGA AGGTGACGGT ATCGATCTTC 
GGCCGGGCGA CCCCGGTCGA ACTGGAATTC ACGCAGGTCA CCAAGACGTC CTGA 

 

Protein sequence

MAKRWYSVSV LSNFEKKIAE QIKHAVAEAG LEDDIEEVLV PTEEVIEVRR GKKVTAERRF 
MPGYVLVRME MTDQGYHLIN SINRVTGFLG PQGRPMAMRD DEVNQILNRV EEGQEAPRSL 
ITFDIGEQVN VTDGPFEGFS GSVEEVDDDN NRLKVTVSIF GRATPVELEF TQVTKTS