Gene Dshi_0234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0234 
Symbol 
ID5712160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp231585 
End bp232649 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content69% 
IMG OID641266130 
Producthypothetical protein 
Protein accessionYP_001531584 
Protein GI159042790 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCA TCAGCGAGAT GCACTATTCC GACGTCTATT CGAACGCGTC CGGCGTGTCG 
GAGTTTCTCG AGCTCGCGCT CGACCCGTCC GAGGATCCCG CCGATTTCAC CGCGAGCTTT
TACAATCACG ACGGCACCGC CCTGATCGAA ATTCCTCTCG ACCATCCGGA TGTCCGCGTC
AGCTTCGATG CCGACAGCGG CGAGAACGTC TATGTCATCT CTCAAGACGA TTTCGTGATC
CGGTTGACCG ATCCCGATGG CGGCGGGACG CTCAACGCCG AGGCGGCGGC CCTGACCGAT
CACACCTCCG GCACGGTCCA CAGCTTCTTC GACATCGGCG GGGAGACCCA GAACATCACC
GCTCTGGACG GTGCGGCCCA GGGGGCGGTC TCGGTCAATG TCTGGCCCCC CACCGGCGCG
GGCATGGCCA CCTATTCGAT CCAGTGGAAC CAGCCCGACC CGACCACGCC GGTGTTCGAG
CCGGTCGATC CCGGCGACAC GGGCATGTGC TTCACCCCCG GCACCCGGAT CGACACGCCC
GATGGCCCGC GTCCGGTCGA ACATTTGCGC CCCGGCGACC TTGTGCTGAC CCGCGACGCG
GGGGCGCAGC CACTGGTCTG GACCGGCGCG CGCCGGGTGC CCGCGGCGGG TGTGCTGGCC
CCCGTGGCGA TCCCGGTGGG CGTCCACGGG GCGACCGCGC CGCTGCTGGT CTCGCCCCAG
CACCGGATCC TCGTGACCGG CTGGCAGGCC GAGTTGCTGA CCGGCGCGGC GGAGGTGCTC
GTGGCCGCCC TGCATCTGGT CGATGGCGAC CGCGTGGTGC GGCGCCCGGG CGGCATGGTG
ACCTATGTTC ACATCCTCTT TGACCGGCAC CAGATCGTGC GCGCCAACGG CGCCTGGTCC
GAGAGCTTTC ATCCGGGCGC GCAGGGCCTC GATACCATGG CGCAGGCCTC CCGGGACGAG
CTTCTGGCAC TCTTTCCCGA GCTTGCCGCC GATCCCGCCG CATATGGTCC CAGCGCCCGG
CCAACCCTGC GGGCCCATGA GGCGCGGCTG CTGTGCAAGC TCTGA
 
Protein sequence
MARISEMHYS DVYSNASGVS EFLELALDPS EDPADFTASF YNHDGTALIE IPLDHPDVRV 
SFDADSGENV YVISQDDFVI RLTDPDGGGT LNAEAAALTD HTSGTVHSFF DIGGETQNIT
ALDGAAQGAV SVNVWPPTGA GMATYSIQWN QPDPTTPVFE PVDPGDTGMC FTPGTRIDTP
DGPRPVEHLR PGDLVLTRDA GAQPLVWTGA RRVPAAGVLA PVAIPVGVHG ATAPLLVSPQ
HRILVTGWQA ELLTGAAEVL VAALHLVDGD RVVRRPGGMV TYVHILFDRH QIVRANGAWS
ESFHPGAQGL DTMAQASRDE LLALFPELAA DPAAYGPSAR PTLRAHEARL LCKL