| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0187 |
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| Symbol | |
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| ID | 5712112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 188367 |
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| End bp | 188981 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641266082 |
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| Product | amino-acid exporter protein |
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| Protein accession | YP_001531537 |
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| Protein GI | 159042743 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.452684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACCG CCTCTTTCCT GCTCACCGCC TTCGTGGTCG TCCTCGCCCC CGGCACCGGG
GTGGTCTACA CTCTCGCGCT CGGTCTGGGC CGAGGCCGCC GCGCCGCCGG CTGGGCCGCC
CTTGGCTGCA CCCTCGGGAT CGTGCCGCAC CTGCTGGCCG TCACCCTCGG GCTGGCGGCG
GTGCTGCACA GCTCGGCGCT CCTGTTCAAC CTGGTGAAAT TCGCGGGCGT CGCCTACCTG
CTCTGGCTCG CCTGGGGCGC GCTGCGCGAC GGCGGCGCGC TGCAGGTCCG CGCCGAGACC
ACCGCCGAGC CCGGCTGGCG CATCGCCCGG CGCGGTGCGC TGATCAACAT CCTGAACCCC
AAGCTGTCGA TCTTCTTTCT CGCCCTCCTG CCCCCCTTTC TGTCGGGCAA CCCGGCTACC
GCCACCGCCG AGATGGTGCT TCTCGGCGCG GTCTTCATGG CCCTGACCTT CGCCGTGTTC
CTCGTCTACG GCGCCTTCGC TGCCCAGGCC CGCGACTGGG TGCTCGGCTC GGCCCGCGCC
ATGGCCTGGC TCAACCGGTC CTTCGCGGCG GTCTTCGCCC TGCTCGCCGG TCGTCTGGCG
CTGGAGCGCG CATGA
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| Protein sequence | MITASFLLTA FVVVLAPGTG VVYTLALGLG RGRRAAGWAA LGCTLGIVPH LLAVTLGLAA
VLHSSALLFN LVKFAGVAYL LWLAWGALRD GGALQVRAET TAEPGWRIAR RGALINILNP
KLSIFFLALL PPFLSGNPAT ATAEMVLLGA VFMALTFAVF LVYGAFAAQA RDWVLGSARA
MAWLNRSFAA VFALLAGRLA LERA
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