Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0178 |
Symbol | |
ID | 5712103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 181801 |
End bp | 182973 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641266073 |
Product | aminotransferase class I and II |
Protein accession | YP_001531528 |
Protein GI | 159042734 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1168] Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0609129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTTCG ACACCGAGAT CGACCGGCGC AACACTGACT GCATCAAATG GGACAAAATG GAGAGCGCCT TCGGCGTCTC GCCCGAGGAC GGGCTGGCCA TGTGGATCGC GGACATGGAT TTCCCGCCAG GCCCGTTTCT GCAGGAGGCC ATGCAGGGCC TGCTCGCCCG CGCCGATTAC GGCTATTTCT GCGGGCTGGA AAGCTATGAG GACGCGATCA TCGGCTGGAT GCGCGACCGC CATGGCTGGA CCGTGGAGCG GGAGTGGATG TTCACCACCT ACGGGCTCGG CAACGGCATC GCCATCACGC TGAACGCCCT GACCGCGCCG GGCGACGAGG TGATCATCTT CTCGCCCGTC TACCACGAGT TTGCCGCCAA GATCACCAAG ACCGGCCGGG TGGTGAAGGA GTTGCCCCTG GCGATCGTGG ACGGGGTCTA CACCATGGAT TTCGACGCCT ATGCGGGGAT GCTGTCGGGG CGCGAGACCA TGGTCATCGC CTGCTCGCCC CACAACCCCG CGGGCCGTGT CTGGACACAA GAGGAGCTGA CCGCGCTCGC CGATTTCTGC CAGCGTCACG ACTTGCTGCT GATCTCCGAC GAGATCCACG CGGACCTGAC CTTCGCAGGC CACACCCATA TCCCGATGCA CGTCGCCGCG CCCCAGATCG CCGACCGGCT GGTGATGACC ACCTCGGCCT CCAAGACCTT CAACATCGCG GGCGGGCGCA CGGGCTGCGT CACCATTCCC GACCCCGACC TGCGCGCGCG GTTTCACCGG TTCTTCAACA CGCTCGACAT GCAGCCCAAC CTGCTGGGCG TGGCCCTCAC GCGAGCGGCC TACTCCCCGG CGGGCGCGGC CTGGTGCGAC GCGCTCTGCA CCTACCTGGA GGGCAACGCC GCGGTCTTCA ATGACGGCGT GAACGCCATC CCCGGCCTCT CGGCCATGCC GATGCAAGGC ACCTATCTGG CCTGGGTGGA TTTCGCGGGC ACCGGCATGG AACGGCCGGA ATTTTCCGAG CGTGTCTATG GCACAGCCCG CATCGCGGCC ACGCCCGGCC ATACACTGGG CAAGGGCGGC GAGAGCTGCC TGCGGTTCAA TGTCGGCATG CCGCGCGCAC GGGTTCAGGA AGCCGTGGAC CGGCTGGCCG ACGCTTTCGC GGACCTGCAG TGA
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Protein sequence | MTFDTEIDRR NTDCIKWDKM ESAFGVSPED GLAMWIADMD FPPGPFLQEA MQGLLARADY GYFCGLESYE DAIIGWMRDR HGWTVEREWM FTTYGLGNGI AITLNALTAP GDEVIIFSPV YHEFAAKITK TGRVVKELPL AIVDGVYTMD FDAYAGMLSG RETMVIACSP HNPAGRVWTQ EELTALADFC QRHDLLLISD EIHADLTFAG HTHIPMHVAA PQIADRLVMT TSASKTFNIA GGRTGCVTIP DPDLRARFHR FFNTLDMQPN LLGVALTRAA YSPAGAAWCD ALCTYLEGNA AVFNDGVNAI PGLSAMPMQG TYLAWVDFAG TGMERPEFSE RVYGTARIAA TPGHTLGKGG ESCLRFNVGM PRARVQEAVD RLADAFADLQ
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