Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0172 |
Symbol | cobH |
ID | 5711640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 175166 |
End bp | 176704 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641266067 |
Product | precorrin-8X methylmutase |
Protein accession | YP_001531522 |
Protein GI | 159042728 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2082] Precorrin isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00890226 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAGGG CCTTCTGCAG TTACCTAGTC GCGGACTGGT CGGCGAACGG GACGCCCAAA ACCGGCAAGG ACAGTATCTG GGTCGCGCTC GTGCAACCCG ATGCGCGCCC CGTGGTCGAA AACCCGTCCA CCCGCAAGGC TGCCATGGCG CTGATCGAGG AGTTGATCGC CGCCGAGCAG GAGGCCGGGC GCCGGGTGCT GGCGGGGTTC GACTTTCCCT TCGGGTATCC CGCGGGCTTT GCCAAAGCCC TCGGCGACGG CGCAGGCTGG CAGGAGGTCT GGGCCCGGAT CGCGGCGGAG GTGTCGGACG GTCCGGACAA CGCCAATGAC CGTTTCGATG CGGCCGCGCG GCTGAACACC CTGTTCCCGG GCGCGGGTCC GTTCTGGGGC AACGGGCTCA AGCGCGACAT CCCCGGTCTG CCGCGCAAGC TGCCCGAGGG CTATGGCACC ACCCTGCCCG CGCGCCTGCG CCACGCCGAG GCACAGGCCC GCGGTGCGCA GGAGGTCTGG AAGCTCTCGG GCGCGGGCTC CGTGGGGGGG CAGGCCCTGA TGGGGATCGC GGCACTCGAA GGATTGCGCC ACCGGATCGG GGCCGCTGTC TGGCCGTTCC AGCCATGGCG CGGGGAGGGC CCGGTCCTGG CCGAGGTGTT CCCGTCCCTG ACCGACATCC CCCACCTGGC GGGCCGGGTG CGCGACGCGG TGCAGGTCGA AAGCCTCGCG CGTGGTTTGG TGCTCCTCGA TGCGGAGGGA CGGCTTGCCC CCTTGCTGGA TGCCGCCGAA CGGCAGCCGG AAGATGTCCG CAGCCATGAG GCCAGCATTC TCGGGCTCGG CTACGAGGCG CTGCTGGGCC GGGCGGTGAA GTCCGGGCTG GGCGCCATGC GGGCGGCGTC CGGCGCCGGG ATGCGCCCCT ATGAGCGCGA TCCCAAGGCG ATCTACGCGC AGTCCTTCAA GACCGTGCGG GCCGAGGCCC GGCTGGACAG GTTCCCCCGC GGGCTCGACC AGGTGGCGGT GCGGCTGATC CATGCCTGCG GGATGGTGGA TGTGGCGGAT CGGCTGGCCT TCTCCGACGG CGCGTTCGAG GCCGGGCGCG CCGCCTTGGA GGCGGGCGCG CCGGTGCTGT GCGATTGCGA GATGGTGGGG GCGGGGATCA TCCGCCGCTA TCTGCCTGCG GGCAACGAGG TGATCGTGAC CCTGAACCGC GCCGAGGTGC CCGCGCGCGC GCAGGCGATC GGCAATACCC GCTCGGCCGC GGCGGTGGAG TTGTGGGAGC CGCTGCTGGG CGGTGCGGTG GTGGCCATCG GCAACGCGCC CACGGCGCTC TTTCACCTGC TGGAGCTGAT CGACGCTGGC GCCCCGAAAC CCGCGCTGAT CCTGGGCTTC CCGGTGGGGT TTGTCGGCGC CGCCGAGAGC AAGGCGGAAC TTGCGGCCAA CCCGCGGGGC TGCGATTTCG TGGCCTTGCG CGGCCGGCGC GGCGGCTCGG CCATGGCGTC GGCGGCCGTG AACGCTTTGG CCGCCGGATT GCCGGAGGTG GAGACATGA
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Protein sequence | MRRAFCSYLV ADWSANGTPK TGKDSIWVAL VQPDARPVVE NPSTRKAAMA LIEELIAAEQ EAGRRVLAGF DFPFGYPAGF AKALGDGAGW QEVWARIAAE VSDGPDNAND RFDAAARLNT LFPGAGPFWG NGLKRDIPGL PRKLPEGYGT TLPARLRHAE AQARGAQEVW KLSGAGSVGG QALMGIAALE GLRHRIGAAV WPFQPWRGEG PVLAEVFPSL TDIPHLAGRV RDAVQVESLA RGLVLLDAEG RLAPLLDAAE RQPEDVRSHE ASILGLGYEA LLGRAVKSGL GAMRAASGAG MRPYERDPKA IYAQSFKTVR AEARLDRFPR GLDQVAVRLI HACGMVDVAD RLAFSDGAFE AGRAALEAGA PVLCDCEMVG AGIIRRYLPA GNEVIVTLNR AEVPARAQAI GNTRSAAAVE LWEPLLGGAV VAIGNAPTAL FHLLELIDAG APKPALILGF PVGFVGAAES KAELAANPRG CDFVALRGRR GGSAMASAAV NALAAGLPEV ET
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