| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0158 |
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| Symbol | cobN |
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| ID | 5711626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 157466 |
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| End bp | 161173 |
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| Gene Length | 3708 bp |
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| Protein Length | 1235 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641266053 |
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| Product | cobaltochelatase |
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| Protein accession | YP_001531508 |
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| Protein GI | 159042714 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
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| TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.75394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCTTC TGGCGGCAAC GCCCGGCAGT ATCGACGACG GGCAGGAGCC CGTTGATCTC
GGGCAGACGC CCGCGGATCT GGTCGTCATC TCCGCCGCGG ATACGGAACT GGCCGGGCTG
AGCGCAGCGC GGGCCGAAAT GGACGCCCCG CCCCGGATGC GGCTGGCCAA CATGATGCAT
CTGCGCCATC CGATGTCCGT CGACCTGCAT ATCGACGATT GCGCCTCGAA GGCCCGGTTG
GTGGTCGCCC GCGTTCTTGG CGGGATGGGC TACTGGCGCT ACGGGGCCGA GCAATACGCC
ACGCGGGTCG CGGCGGCGGG CGGGCATGTG GTTCTTCTGC CAGGCGACGA CAAGCCCGAT
CCCGAGCTGC GCGCTCTCTC GACCCTGCGC GGCGCGGAAT ACGACGCGCT CTGGTCCTAC
CTAGTGGAAG GCGGGCCCGA GAATGCGGTG CATTTCCTGG CCTATGCGCG GCACTTGCTG
GACCCGGCGC AGCCCGCGCC GCCCGCCGCG TCGCCGCTTC TGCGCGCGGG GGTCTACTGG
CCCGGCGCGG GGCTGAGCAA TCTGGATACG GTGCGCGCAC AGTGGACCGA AGGCGCGCCG
GTGGTGCCGC TGATCTTCTA CCGCGCCCTG GTGCAAGGGG CCGGGCTGCA TCCGATCAAC
CGCATGGTCA AGGCCTTGCG GGCCCGGGGG CTGAACCCGC TGCCGGTTTT CGTGGCGTCC
CTGAAGGACC CGGTTTCCGC GGCGACGCTG GAGCATCTGT TCGAAGCAGC CCCACCGGAC
GTGATCCTGA ACTGCACCAG CTTTGCCGTG GGACTGCCGG GGACGGAACG GCTGAGCCAG
GGGGCGTCGA ACCCCCTGGC GCAGCCAGCC GCCCGGGGGG CGCCTGTGTT CCAGGTCGTT
CTGGCCGGAT CGAGCCTGGA GGCCTGGGAA GGCGGCACCG CGGGCCTTTC GGCGCGGGAC
ATCGCCATGA ACGTGGCCCT GCCGGAGGTC GATGGTCGGG TGCTGACCCG GGCGGTCAGC
TTCAAGGGCG AGGCGTTCTT TGACGACGCC ACGGAATGCG CCATCGCCAC CTACCAGGCC
CAGGGCGACC GGATCGGCTT TGTCGCCGAT CTCGCCGCGA ACTGGGCACG GCTGCGACGG
ACGCCGCCGG GCGAGCGGCG CACCGCGCTG ATCCTTGCCA ACTATCCCAA CAAGGACGGG
CGGCTGGCAA ACGGGGTCGG CCTCGACACG CCCGAGGCCA CGGCGCGGAT GCTCCAGCTG
CTGCGCGACG CGGGCTACGG GGTGGACGCC CCCCCCGCCG ATGGCGCGGC CCTGATGGAC
CGGATCCTCG CCGGCCCGAC CAACTGGCTG ACGGACAGGG CGGAGCGGAC GGGCGGCGTG
CGCCTGCCGC TGGACACCTA CCGGGCCCAT TACGCGGCCC TGCCGCTGGC GCTGCGGTCC
CAGATCGAGG ACCGCTGGGG CGCACCCGAG GACGATCCGT TCTGTGCCGA CGGGGCCTTC
GCCCTGTCGG TGATCCCCTT CGGCAACGTG GTGGTCGGCA TCCAGCCCGC CCGCGGTTAC
AACATCGACC CGACGGAGAC CTACCACGCC CCGGACCTCG TGCCGCCGCA CAACTACCTC
GCCTTCTACA TCTGGCTGCG CCATGTCCAA GGCGCCCATG CGCTGGTCCA CATGGGCAAG
CACGGCAATC TCGAATGGCT GCCGGGCAAA TCGGTGGCCC TGTCGGAGAC CTGCTTTCCC
GAGGCGGTGT TCGGCCCCCT GCCCCATGTC TATCCCTTCA TCGTCAACGA TCCGGGCGAA
GGCACCCAGG CCAAGCGCCG GGCGCAGGCG GTGATCATCG ACCACCTGAC CCCGCCGCTG
ACCCGGGCCG AGACCTATGG CCCCCTGCGC GACCTCGAAG GGCTGGTGGA CGAGTATTAC
GAGGCCGCCG GGGTCGATCC GCGCCGGATC GCCGAGCTGC GGCGTGAGAT CCTGTCGCTG
ACCTCGGTCA CCGGGCTCGA CAAGGATGCG GGCTTCACCG GAGAGGAAGA CAACGATCTG
GCCAAGCTCG ACGCTTATCT CTGCGAGTTG AAGGAGGCGC AGATCCGCGG CGGGCTGCAC
ATCTTCGGCA CAGCACCCAC GGGGCGGCTG GCGCGCGATC TGGCCATCGC CCTGACCCGG
CTGCCGCGCG GCGACGGGAC CGGGGGCGAT GCGTCGCTCC TGCGAGCGCT GGCAGGTGAC
CTGGACCTCG GATTCGACCC GCTGGACTGC GACATGGCGG CGGCCTGGGA GGGTCCGCGC
CCGGACATGC TCGCCGCGAT CGCCAAGGAC AGCTGGCGCA GCACCGGCGA CACGGTGGAA
CGGTTGGAAC TGCTGGCGGC GGCCTGCGTC GAGGGCGCTC CGGCCCCGGG CCCGCAGAGC
GCGACGGTGC TGGCCGAGAT CGCGGCGGAC GTCCTGCCCA CCATCGCCGC CTGCGGCCCG
GCCGAGGGGG CGGGCCTCCT CACCGCCCTG GATGGGCAGT TCGTCGCCCC GGCGCCCTCC
GGCGCGCCCA CGCGGGGCCG CCTGGACGTG TTGCCCACGG GGCGGAATTT CTATTCCGTC
GACAGCCGCG CCATTCCGAC CCCAACCGCG TGGAAGCTGG GCTGGAAATC GGCCAATTTG
CTGATCGAGC GGCATTTGCA GGACCAGGGC GACTGGCCCA GAACGCTGCT GCTGACCGCC
TGGGGAACAG CGAACATGCG CACAGGCGGG GACGACATCG CCCAGTGCCT GGCCCTGATG
GGCGTCAAGC CGCGCTGGGA CGCCGCCAAC CGGCGCGTCA CCGGGTTCGA GGTGCTGCCC
CTCTCGGTCC TCGGCCGTCC GCGCGTCGAC GTGACCCTGC GCGTTTCGGG CTTCTTCCGC
GACGCCTTCC CGCAGCAGAT CGCCCTGGTG GACAGTGCCG CCCGCGCCGT CATGGCCCTG
GACGAACCCG AGGCCGACAA CCCCGCCGCC GCCCGCGCCC GGGCCGAGGG GCATACCGCG
CGGGTCTATG GCTCCAAGCC CGGGGCCTAT GGCGCGGGGC TGCAGGCGAT GATCGACGAG
CGGCTCTGGG CCGACAAGGC GGACCTGGCC GAGGCCTATA TCGGCTGGTC AAGCTATGCC
TACGGGGCAG AGGCCGAAGG CACCCCGGAC CGCGACGGCT TCACCGCGCG CCTGTCCCAG
GCCGACGCCA TCGTGCAGAA CCAGGACAAC CGCGAGCACG ACCTGCTGGA CAGCGACGAC
TACTACCAGT TCGAGGGCGG CGCCGCGGCG GCCATCGCGA CCCTTCAAGG GGCGGAACGG
CCGATCTATC ACAACGACCA TTCGCGCCCG GAACGCCCGG TGATCCGTAC CCTCGACGAA
GAGATCGGCC GCGTGGTCCG GTCCCGCGTG GTCAACCCGA AATGGATCGC GGGCGTGAAA
CGCCACGGCT ACAAGGGCGC GTTCGAGATC GCGGCCACGG TGGATTACAT GTTCGCCTTC
GCCGCCACGA CCGGCGCGGT CAAGAGCCAC CATTTCGACC TCGTCCACGC CGCCATGCTG
GAGGATGACG ACACGCGGGA GTTCATCGCC GAGGCCAACC CGGCGGCCCT GCGCGAGATC
GCGGAGCGAC TGTCGGAGGC AATCGACCGC GGCCTGTGGC AACCCCGCTC GAACTCCGCC
AAGGCCCGGC TGGCCCAGTT GGGGGCCGAC ACCCAAGCCG CGGAATGA
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| Protein sequence | MHLLAATPGS IDDGQEPVDL GQTPADLVVI SAADTELAGL SAARAEMDAP PRMRLANMMH
LRHPMSVDLH IDDCASKARL VVARVLGGMG YWRYGAEQYA TRVAAAGGHV VLLPGDDKPD
PELRALSTLR GAEYDALWSY LVEGGPENAV HFLAYARHLL DPAQPAPPAA SPLLRAGVYW
PGAGLSNLDT VRAQWTEGAP VVPLIFYRAL VQGAGLHPIN RMVKALRARG LNPLPVFVAS
LKDPVSAATL EHLFEAAPPD VILNCTSFAV GLPGTERLSQ GASNPLAQPA ARGAPVFQVV
LAGSSLEAWE GGTAGLSARD IAMNVALPEV DGRVLTRAVS FKGEAFFDDA TECAIATYQA
QGDRIGFVAD LAANWARLRR TPPGERRTAL ILANYPNKDG RLANGVGLDT PEATARMLQL
LRDAGYGVDA PPADGAALMD RILAGPTNWL TDRAERTGGV RLPLDTYRAH YAALPLALRS
QIEDRWGAPE DDPFCADGAF ALSVIPFGNV VVGIQPARGY NIDPTETYHA PDLVPPHNYL
AFYIWLRHVQ GAHALVHMGK HGNLEWLPGK SVALSETCFP EAVFGPLPHV YPFIVNDPGE
GTQAKRRAQA VIIDHLTPPL TRAETYGPLR DLEGLVDEYY EAAGVDPRRI AELRREILSL
TSVTGLDKDA GFTGEEDNDL AKLDAYLCEL KEAQIRGGLH IFGTAPTGRL ARDLAIALTR
LPRGDGTGGD ASLLRALAGD LDLGFDPLDC DMAAAWEGPR PDMLAAIAKD SWRSTGDTVE
RLELLAAACV EGAPAPGPQS ATVLAEIAAD VLPTIAACGP AEGAGLLTAL DGQFVAPAPS
GAPTRGRLDV LPTGRNFYSV DSRAIPTPTA WKLGWKSANL LIERHLQDQG DWPRTLLLTA
WGTANMRTGG DDIAQCLALM GVKPRWDAAN RRVTGFEVLP LSVLGRPRVD VTLRVSGFFR
DAFPQQIALV DSAARAVMAL DEPEADNPAA ARARAEGHTA RVYGSKPGAY GAGLQAMIDE
RLWADKADLA EAYIGWSSYA YGAEAEGTPD RDGFTARLSQ ADAIVQNQDN REHDLLDSDD
YYQFEGGAAA AIATLQGAER PIYHNDHSRP ERPVIRTLDE EIGRVVRSRV VNPKWIAGVK
RHGYKGAFEI AATVDYMFAF AATTGAVKSH HFDLVHAAML EDDDTREFIA EANPAALREI
AERLSEAIDR GLWQPRSNSA KARLAQLGAD TQAAE
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