| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0149 |
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| Symbol | dapA |
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| ID | 5711617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 148351 |
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| End bp | 149226 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641266044 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_001531499 |
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| Protein GI | 159042705 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAAG GGTCTATGCC AGCGCTGGTC ACGCCGATGA AAGACGGGGC CGTGGACTTT
GCCACGCTCG AAGCGCTGGT CGAATGGCAG ATCGCCGAAG GCAGTCACGG GTTGGTGCCC
GTGGGCACGA CCGGCGAGAG CCCGACGCTG AGCCACGAGG AGCACGAGGC GGTGGTCGCC
AAGGTCATCG AGGTCGCCGC GGGCCGGGTG CCGGTGATCG CGGGCGCGGG GTCGAACAAC
ACGGTCGAAG CCGTGCGCTT CGTGCGCCAC GCCAAGGACG CCGGGGCCGA TGGCGCGCTG
GTGGTCACGC CCTATTACAA CAAGCCGACC CAGGGGGGCA TGATCGCCCA TTACACCGCC
CTGGCGGAGG CCGCGGACAT CCCCATCGTG ATTTACAACA TCCCCGGCCG GTCCGTGGTG
GACATGACCC CCGCGACCAT GGCGGCGCTT GCTGCCCTGC CGACGATCGT GGGCGTGAAG
GACGCGACCG GGGATCTGGC GCGCGTCAGC CAGACCCGCA TGGCCTGCGG GCCGGAGTTC
ATCCAGCTGT CGGGCGAGGA TGCCACGGCT TTGGGCTTCA ACGCCCATGG CGGGGTCGGC
TGCATTTCGG TCACGGCCAA TGTGGCCCCC GCGCTCTGCG CGCAGTTCCA GGAGGCGACC
CTGGCGGGCG ATTTCGCCAC GGCGCTGGCG CTGCAGGACA AGCTGATGCC GCTGCATGAG
GCGATCTTCG TGGAGCCGGG GCTGGTGGGG GCGAAATATG CCCTGTCGCT GCTGGGCAAG
TGTTCGGAAG ACGTGCGCCT GCCGCTTCTG GGTCTGAGCG ACGGCACCAA GGTGCTGATC
AAGGACGCGA TGATCCATGC AGGGATCCTT GGCTGA
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| Protein sequence | MFKGSMPALV TPMKDGAVDF ATLEALVEWQ IAEGSHGLVP VGTTGESPTL SHEEHEAVVA
KVIEVAAGRV PVIAGAGSNN TVEAVRFVRH AKDAGADGAL VVTPYYNKPT QGGMIAHYTA
LAEAADIPIV IYNIPGRSVV DMTPATMAAL AALPTIVGVK DATGDLARVS QTRMACGPEF
IQLSGEDATA LGFNAHGGVG CISVTANVAP ALCAQFQEAT LAGDFATALA LQDKLMPLHE
AIFVEPGLVG AKYALSLLGK CSEDVRLPLL GLSDGTKVLI KDAMIHAGIL G
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