Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0134 |
Symbol | pcd |
ID | 5711602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 133058 |
End bp | 133351 |
Gene Length | 294 bp |
Protein Length | 97 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641266029 |
Product | pterin-4-alpha-carbinolamine dehydratase |
Protein accession | YP_001531484 |
Protein GI | 159042690 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2154] Pterin-4a-carbinolamine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.490249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAGA AACTGGATGA CAGCACACGG GACGAGCACC TTGCGCCGTT GATGCGCGCG GGCTGGGAGA TGGTCGAGGG GCGCGACGCG ATCAAGAAGA CCTTCGTGTT CGGCGACTTC ACCGAGGCGT TCGCCTTCAT GACCGGCACA GCCCTTTGGG CAGAGAAATG GGACCATCAC CCGGAATGGA GCAACGTCTA CAAGACCGTC GAAGTGACGC TGACCACCCA TGACGTGGGC GGTTTGTCGG AGTTGGATAT CAAGCTCGCC AGCAAGATGG ACAACCTCGC CTAG
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Protein sequence | MAQKLDDSTR DEHLAPLMRA GWEMVEGRDA IKKTFVFGDF TEAFAFMTGT ALWAEKWDHH PEWSNVYKTV EVTLTTHDVG GLSELDIKLA SKMDNLA
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